| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4150 |
|---|
| Symbol | |
|---|
| ID | 5423023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4592936 |
|---|
| End bp | 4594573 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640883407 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001419029 |
|---|
| Protein GI | 154248071 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC CTCCCGTTCC GCCGGCCCTC GCGCGGATCC TCGCGCTTCC CCTTCTCGCC
CTTCTTCTGG CTGTCCTCCT CCCCGCCTGC GCGGTGCGCG CGCAGGCACA GGCCGATATT
TCGGCCATCG TCGCGAAATT CGCGAACGAC AGCTATTCGG ATACGACCGA CGCGCTGGTT
GAGCTTTCGG CCACCGGCAG CGCCCAGGCC GCCGCCGTGG TGGAGGCGCT CGGTGCCGGC
CGGCTGATGT TCGATCCGGC CACCAAGGCG GTCTATATCC GCACCCCCGC CGGCATGGCC
GATGCTGCCA CCGGCACCAT CGTCGCCAAT GCGCCGACCA ACCTCTCCGT GGTGCGCGCC
AACAACCGGG TGCGCCGCGC CATCGATGCG GCTTCCGGCG CGCTCTCGCT GCTCAATCCC
GATCCGGTCC GCCGCGCCGA GGCTGCAGCC GCCGTCTTCA AGTCGCGCGA TGCCGCTGCG
CTGGCGACGG TGGAGGCCGC CATCGCCAAG GAGACGGTGG GAAGCGTGAA GGATGCGCTG
GAGCAGGCCC GCGCCGCCAT TCTCGTCGGC AAGTCCGAGG TGCCCGAGGC GGTGCGGCTC
CTCGCCATCC AGAAGATCAC CGCCCGCGGC GACCAGGAGG CCATCAGCCT GCTGCGCAGC
CTGCCGGCGG ACGCCCCCGC CAGCCTCAAG GCCGCGGCCG AGGCCGGCAT CGCGAAGGTG
GAGCAGAATC TCAAGTTCTG GGCCGTGGCG CAGAATGTCT GGTACGGCCT GTCGCTGGGC
TCGGTGCTGC TTTTGGCGGC CATCGGGCTG GCCATCACCT TCGGTGTCAT GGGCGTCATC
AACATGGCCC ACGGCGAGAT GGTGATGCTG GGTGCCTACA CCACTTTCGT GGTGCAGGAC
TTCATCCGCC ATTCGGCGCC CGGCCTGTTC GACTGGTCGC TGGCCATCGC CCTGCCGCTG
GCCTTCCTGT TCACCGGCCT CGTGGGCATC CTCATCGAGC GCACGGTGAT CCGCTTCCTC
TACGGCCGGC CGCTGGAAAC CCTGCTCGCC ACCTGGGGTG TCTCGCTCAT CCTCCAGCAG
GCGGTGCGGT CCGTGTTCGG CCCCACCAAC CAGGAGGTGG GGGCACCATC CTGGATGTCG
GGCGCGTTCC AGGTGGGCCA GCTCTCCATC ACCTATAACC GCCTGTGGAT CATCGTCTTC
GCCCTGCTGG TGTTCTTCGC TCTGCTGCTG GTGCTGAAGC GCACGCCCCT CGGCCTCTAT
GTGCGCGCGG TGACGCAGAA CCGGCGCATG GCGGCGGCCA TGGGCATCCG CACCGGGCGC
ATCGACGCGC TCACCTTCGG CCTCGGCTCC GGCATCGCCG GCATCGCGGG CGTGGCGCTC
TCGCAGATCG ACAATGTGAG CCCCAACCTC GGGCAGGGCT ACATCATCGA CAGCTTCATG
GTGGTGGTGT TCGGCGGGGT CGGGAACCTC TGGGGCACGC TGGTGGGCGC CTTCACGCTG
GGTATCGCCA ACAAGCTGCT GGAGCCCTTC GCCGGCGCGG TGCTGGGCAA GATCCTGCTG
CTCGTCTTCA TCATCCTGTT CATCCAGAAG CGCCCGCGCG GCCTGTTCGC GCTCAAGGGC
CGGGCGGTGG AATCGTGA
|
|---|
| Protein sequence | MMRPPVPPAL ARILALPLLA LLLAVLLPAC AVRAQAQADI SAIVAKFAND SYSDTTDALV
ELSATGSAQA AAVVEALGAG RLMFDPATKA VYIRTPAGMA DAATGTIVAN APTNLSVVRA
NNRVRRAIDA ASGALSLLNP DPVRRAEAAA AVFKSRDAAA LATVEAAIAK ETVGSVKDAL
EQARAAILVG KSEVPEAVRL LAIQKITARG DQEAISLLRS LPADAPASLK AAAEAGIAKV
EQNLKFWAVA QNVWYGLSLG SVLLLAAIGL AITFGVMGVI NMAHGEMVML GAYTTFVVQD
FIRHSAPGLF DWSLAIALPL AFLFTGLVGI LIERTVIRFL YGRPLETLLA TWGVSLILQQ
AVRSVFGPTN QEVGAPSWMS GAFQVGQLSI TYNRLWIIVF ALLVFFALLL VLKRTPLGLY
VRAVTQNRRM AAAMGIRTGR IDALTFGLGS GIAGIAGVAL SQIDNVSPNL GQGYIIDSFM
VVVFGGVGNL WGTLVGAFTL GIANKLLEPF AGAVLGKILL LVFIILFIQK RPRGLFALKG
RAVES
|
|---|
| |