Gene Xaut_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4136 
Symbol 
ID5425096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4577305 
End bp4578618 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID640883392 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001419015 
Protein GI154248057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0328003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG CGGAATGGCT TTCAGCGACC GGAACGAAGC GTAGCGCCTT TGCGAAGCAG 
GTGGGCATGT CGCCTGCCAG CGTCACGGCC CTGTGCAACG ACGACCGCGC CTGGATTTCC
CGCGAGACCG CCGAGAAGAT CGCGCAGGCC ACGGGACACG AGGTCACGCC GAACGATTTC
CTCGGGCTTC CCGCGCCCAG TATCCGAGGT TTAGCCGTGA CCGATAATAC CCAGGCCCGC
GTCCAGTCCG CCATCGAAGC GTTCGCGCGG GGAGAGATCG TGGTCGTCAC CGACGACGAT
GATCGCGAGA ACGAAGGCGA TCTCATCCTC GCCGCTTCCC TCGCCACGCC GGAGAAGATG
GCTTTCGTCA TCCGCAACAC CTCCGGCATC GTCTGCACGC CCCTGCCCCC GTCCGAGGCC
AAGCGGCTGC GGCTCGATCC CATGGTGTCG AACAACGATG CGCCCATGGG CACCGCCTTC
ACCATCTCCA TTGACGTGAA GCACGGCACT ACGACCGGCA TCTCGGCAGA AGAGCGCACC
AACACCGTGC GGGCGCTGGC CAATCCCAAC ATGGGCGCGG CCGATTTCGT GCGGCCGGGC
CACGTGTTCC CGCTCATCGC CAAGGAAGGC GGCGTGCTCA TGCGCTCGGG CCACACCGAG
GCGGCCGTGG ACCTGTGCCG GCTCGCGGGC GTGCCGCCGG TGGGCGTCAT CGCCGAACTG
GTGAACGACG ACGGCACCGT GCAGCGCGGC CCGCAGGTCA CCGCCTTTTC CGAGAAGCAC
GGCCTCACCC GCATCTCGGT GGCGGACCTC ATCTCCTACC GGCAGGCCCG CGAGAAGCTG
GTGACGCGTG CGGCGGAATT TCCCGTGCCC ACCTGCGTCG GCGAGCTGCA GGGCTTTTCC
TATGTGACGC CGTTTGATCC GGTGAACCAC CTGGCGCTGG TCAAGGGCCG CATCGGCGAC
GGCGAGAAGG TGCTGGTGCG CCTGCACCGC GCCGATCCCA TCGCCGACGC CTTCGGCGGC
GGCAAGACCA TCCAGCGGGC GCTGGAGCGC ATCGAGGCGG AAGGCCGCGG CGTGCTGGTC
TATCTGCGCG ACGGCACCGC CGGCGTGCCC GCCGTCGCCA TGGGCCATGG CGGGGAAAAG
TCGTCCAGCG AGATCGAGCG TGACCGCCAC TGGCGTGAGG TCGGCCTCGG CGCCCAGATC
CTGCGCGACC TCGGCATCGT CTCGATTCGC CTGCTGGCCT CCAAGTCCCG CACCTATGTG
GGCCTCGCCG GCTTCGGCAT CGAGATTGTG GACACCGAGC CCCTCGACGC CTGA
 
Protein sequence
MKLAEWLSAT GTKRSAFAKQ VGMSPASVTA LCNDDRAWIS RETAEKIAQA TGHEVTPNDF 
LGLPAPSIRG LAVTDNTQAR VQSAIEAFAR GEIVVVTDDD DRENEGDLIL AASLATPEKM
AFVIRNTSGI VCTPLPPSEA KRLRLDPMVS NNDAPMGTAF TISIDVKHGT TTGISAEERT
NTVRALANPN MGAADFVRPG HVFPLIAKEG GVLMRSGHTE AAVDLCRLAG VPPVGVIAEL
VNDDGTVQRG PQVTAFSEKH GLTRISVADL ISYRQAREKL VTRAAEFPVP TCVGELQGFS
YVTPFDPVNH LALVKGRIGD GEKVLVRLHR ADPIADAFGG GKTIQRALER IEAEGRGVLV
YLRDGTAGVP AVAMGHGGEK SSSEIERDRH WREVGLGAQI LRDLGIVSIR LLASKSRTYV
GLAGFGIEIV DTEPLDA