Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3948 |
Symbol | |
ID | 5421139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4369025 |
End bp | 4370347 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640883204 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001418829 |
Protein GI | 154247871 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATG AGCCTCCCGT CATCGGCCTC GTGGAGGACG ATCCCATCAT GGGCGAGAGC CTCGCGCAGC GGCTCGGCCT GGAGGGAATG AGGGTGCATT GGTGGCGGAC CGGCTGCGCA GCGGTGGCGG ATATCCGGAA GATTCGCTTC GAGGCTATCG TATGCGACAT CCGCCTTCCG GATCTCGATG GGGAGGCTGT GTTCCGGGAA GCGGCGCACG TGCCTCGGAC GCCGCCTTTC CTGTTCGTGA CCGGCCATGG CGACATCGAC CAAGCGGTGC GCCTGATGCG GTCCGGCGCG GCGGACTACG TCACCAAGCC CTTCGAGATG GAGGACTTCC TGGCGCGGCT CACCGACTTG CTGATGCCGC ATGGAACCAC GGAAGGCGGC ACGTTGGGCG TCTCACCCGC CATCCGGCAG GTGGAGGCTC TGTTGTGCAG GATGGCTCGC CTGTCCTCCA ATCTGCTCAT CACGGGGGAG ACAGGGACAG GTAAGGATGT AGCCGCCCGC TTCATCCATG CGCAATCGCG GCACGCGACC GCGCCGTTTA TCGCGGTCAA CTGCGCCGCC ATTCCCGCCG ACTTGATGGA AAGCGAGCTG TTCGGCCACG AGCGAGGCGC GTTCACCGGT GCCGCGCAGC GCCATCTCGG CTATGTGGAG CGCGCCGGCG ACGGCACGCT GTTTCTCGAC GAGATCGGGG AATTGCGTCC GGAGTTGCAG GCAAAACTCC TGCGGCTGAT CGAGAGCAAG ACGTTTCAGA GGGTCGGCGG TGAGCGCGAG ATCGCCTTCG GCGGCCGTAT CGTGACGGCC ACCAACGCCG ATCTGGCGCT GCGAGTTGTC GAGCGACAAT TCCGCGAGGA TCTCCTTTAC CGCATCAACG CGGTCAGCAT TCGCCTGCCA TCTCTGCGGG AGCGCCCCGA TGACATCCCA TGGCTCATGG AGCGCTTCTT TACGGAATAT AGCGCGGACA CCGAGACCAA CCTGAAAGGG ATCAGCGCCC TCGCCGAGGA GGCCGCGATG CAGCATCCTT GGCCCGGGAA TGTGCGGGAG CTGCGGAACC GGATGGAGCG TGCGGTCGCT CTTGCCTTGG GCCCCTGGCT GATGCCCGGG GATCTCTTTC CCGAGATCGT TCGCGAAGGC GCTGACGCCG GCCTACGGAT CGGCTCACTG GAATCCGCGC GCCAGGAGGC GGAGAAGCGT CACATCCTCC GGGCGCTGTT CGCGACCGCG GGCGAACTCT CCGCCGCCGC CCGGCTCCTC GGCGTTGGGC GCACCACCCT GTGGGAGAAG ATGCGCCGCC TCGGTTTGGG TAGCGACGGC TGA
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Protein sequence | MSHEPPVIGL VEDDPIMGES LAQRLGLEGM RVHWWRTGCA AVADIRKIRF EAIVCDIRLP DLDGEAVFRE AAHVPRTPPF LFVTGHGDID QAVRLMRSGA ADYVTKPFEM EDFLARLTDL LMPHGTTEGG TLGVSPAIRQ VEALLCRMAR LSSNLLITGE TGTGKDVAAR FIHAQSRHAT APFIAVNCAA IPADLMESEL FGHERGAFTG AAQRHLGYVE RAGDGTLFLD EIGELRPELQ AKLLRLIESK TFQRVGGERE IAFGGRIVTA TNADLALRVV ERQFREDLLY RINAVSIRLP SLRERPDDIP WLMERFFTEY SADTETNLKG ISALAEEAAM QHPWPGNVRE LRNRMERAVA LALGPWLMPG DLFPEIVREG ADAGLRIGSL ESARQEAEKR HILRALFATA GELSAAARLL GVGRTTLWEK MRRLGLGSDG
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