Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3820 |
Symbol | |
ID | 5425227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4236433 |
End bp | 4237647 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640883076 |
Product | polysaccharide export protein |
Protein accession | YP_001418701 |
Protein GI | 154247743 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.388057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCT GCGGCATGTA TAACTGCCCC ACTCTTTGTC GGGCGTATCA GAAGCGGAAT CGAATGACGG GCTGGGTTCG GTTTGTCGCC ATGGGCCTCC TCGCCGGGGC AGCAGCCGGT TGCACGGTGC TGCCGTCGTC GGGGCCGTCG CGCACCGAAA TCGAGATGCA GCAGCCCGAA GATGACCAGC GCTACCTGCT CATCGACGTG GACGACCGCA CCCTGCACCT GATGCAGCAG CAGCGCCCGG CCAGCTTCGG CGTCCGCTTC GGCGACTATC GCCCGCCGGG CCGCTACGTG GTGGGCGTGG GCGATTCCAT CTCCGTCACC ATCTGGGAAG CCGCCGCCGG CGGTCTGTTC TCCGGCCCGG TCATCGACCG GCTGGGCACC GGATCGCGCA GCGCCACCAT TCCCGACCAG CAGGTGGCGC AGGACGGCTC CGTCACCGTG CCCTATGCCG GGCGCATCCA GGTGGCCGGC AAGACCACCT CGCAGATCGA GCAGGCCGTG GTGGACCGCC TCACCGGCAA GGCCATCGAG CCGCAGGCCG TGGTGGTGGT GACCCGCAGC GTCAGCAATT CCGCCACCGT GCTGGGCGAG GCCACCTCCG GCGCCATCGT GCCCCTCTCG CCCCGCGGCG ACCGGGTGCT GGACGTGATC GCCGCCGCCG GCGGCATCAA GGTTCCGGCC CATGAGGTGT TCGTGCGCCT GAGCCGCGGC AACGCCACCG TCACCCTGCC CCTGCAGCGG CTGCTCAACG ATCCCAAGGA AGACGTTTAC GTCCGCCCGC TGGACAAGAT CGTCGTCATC CGCGACCCGC AGACCTTCAC CGTGTTCGGC GCGGCGGGCA ATCCCACCGT GGTTCCGTTC GATGCGGTGG GCATCACGCT TGAGGAGGCG GTCGCGCGCG TCGGCGGCCT GGTGGACCAC AGGGCCGACC CCTCGGGCGT CTATCTCATG CGCCTCGAGC CGCTCGGCTT CGCCACCCAG CTGCGGCCCG ATGCGCGGCC GCTTGAAGCC TACGGCTACG TGCGCGTGAT CTATCGCTGG AACATGCGCG ATCCCAACTT CATCTTCCTC GCGCGCGGCT TCCAGATCCG CAACAAGGAC GCGATCTACG TGGCCAACGC GCCGCTGTCG GATCTGCAGA AGATCACCTC CGTGTTCAAT GCCGTCGCCC AGCCCGTGGC CACCACGGTG GCGGTGGTGC CTTAG
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Protein sequence | MDACGMYNCP TLCRAYQKRN RMTGWVRFVA MGLLAGAAAG CTVLPSSGPS RTEIEMQQPE DDQRYLLIDV DDRTLHLMQQ QRPASFGVRF GDYRPPGRYV VGVGDSISVT IWEAAAGGLF SGPVIDRLGT GSRSATIPDQ QVAQDGSVTV PYAGRIQVAG KTTSQIEQAV VDRLTGKAIE PQAVVVVTRS VSNSATVLGE ATSGAIVPLS PRGDRVLDVI AAAGGIKVPA HEVFVRLSRG NATVTLPLQR LLNDPKEDVY VRPLDKIVVI RDPQTFTVFG AAGNPTVVPF DAVGITLEEA VARVGGLVDH RADPSGVYLM RLEPLGFATQ LRPDARPLEA YGYVRVIYRW NMRDPNFIFL ARGFQIRNKD AIYVANAPLS DLQKITSVFN AVAQPVATTV AVVP
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