Gene Xaut_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3793 
Symbol 
ID5422606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4199330 
End bp4199794 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID640883049 
Productendoribonuclease L-PSP 
Protein accessionYP_001418675 
Protein GI154247717 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.756407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC CCATCGACGC CAAGCTGGCG GAACTCGGAA TCACCCTGCC GACGCCGACG 
CCACCGCTCG CCAATTATGT CCCCGTGGTG CGCACCGGCA ACCTGCTGTT CATCTCCGGC
CAGGTTTCCA TCGACGGCGC CGGCAAGATC GTGACCGGAA AGCTCGGCGC GGGTGTGGAG
ATCGAGGCCG GCCGCGAGGC CGCGAAGCTG TGCGCCATCA ACATCCTGGC CCAGGTGAAG
GCCGCCATCG GCGACCTCGA CAAGGTGGTG CGGGTGGTCA AGCTCGTCGC CTTCGTGAAC
TCCGCACCCG ATTTCCTGGA CCAGCCCAAG GTGGTGAACG GCTGCTCCGA CTTCTTCGTG
GAAGTGCTCG GCGACAAGGG CCGCCACGCC CGCTCCGCCG TGGGCGTCGC CGCCCTGCCG
TTGGACGCAG CAGTGGAAGT GGACGCCATC GTGGAAGTGG TGTGA
 
Protein sequence
MTSPIDAKLA ELGITLPTPT PPLANYVPVV RTGNLLFISG QVSIDGAGKI VTGKLGAGVE 
IEAGREAAKL CAINILAQVK AAIGDLDKVV RVVKLVAFVN SAPDFLDQPK VVNGCSDFFV
EVLGDKGRHA RSAVGVAALP LDAAVEVDAI VEVV