Gene Xaut_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3379 
Symbol 
ID5424093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3765897 
End bp3766784 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID640882632 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001418265 
Protein GI154247307 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CATCCGACGC CGCCCTCCAG GCCGCCCCGG TGCAGAAGGC CCGCGGCTAT 
TGGGCCACCG TGGGCCGCCG CTTTTCCCGC GACAAGGTGA GCATGGTGTG CGCGGCGGTG
CTGCTCGCCA TCGTGCTCGC CGCCATCTTC GCCCCCTGGC TCGGCCTTGC CGATCCCTAC
CAGGGCTCCA TGGTCCGCCG CCTCCGCCAC ATCGGCACGC CGGGCTATCT GCTCGGCACC
GACGAGCTGG GCCGCGACAT GCTCTCCCGT CTCATCTATG GCGGGCGCCT CTCGCTGCTC
ATCGGCATCC TGCCGGTGGT GCTCGCCTTC GGCATCGGCA CCAGCCTCGG CCTGCTCGCC
GGCTATCTGG GCGGGGCGGT GAACACCATC ATCATGCGCA CCATCGACGT GTTCTACGCC
TTCCCCTCGG TGCTGCTGGC CATCGCCATC TCCGGGGTGC TGGGGGCGGG CATTGTCAAT
TCCATCGTCT CGCTCACCAT CGTGTTCGTG CCGCAGATCA CCCGCGTGGC GGAGAGCGTG
ACCACCTCGG TGCGCAACCT CGACTTCGTG GATGCGGCGC GGGCCTCCGG GGCCGGGGCC
ATCACCATCA TGCGGGTGCA CATGCTGGGC AACGTGCTCG GTCCGATCTT CGTCTATGCG
ACGGGGCTGA TCTCGGTATC CATGATCCTG GCCTCGGGCC TGTCCTTCCT CGGCCTCGGC
ACCAAGCCGC CGGAGCCGGA ATGGGGCCTG ATGCTGAACA CCCTGCGCAC CGCCATCTAC
GTCAACCCGG GCGTGGCCGC CCTGCCGGGG GTGATGATCT TCGCCGTCTC CATCTGCTTC
AACATGCTCA GCGACGGGCT GCGCAGCGCC ATGGACATCC GCAATTGA
 
Protein sequence
MSATSDAALQ AAPVQKARGY WATVGRRFSR DKVSMVCAAV LLAIVLAAIF APWLGLADPY 
QGSMVRRLRH IGTPGYLLGT DELGRDMLSR LIYGGRLSLL IGILPVVLAF GIGTSLGLLA
GYLGGAVNTI IMRTIDVFYA FPSVLLAIAI SGVLGAGIVN SIVSLTIVFV PQITRVAESV
TTSVRNLDFV DAARASGAGA ITIMRVHMLG NVLGPIFVYA TGLISVSMIL ASGLSFLGLG
TKPPEPEWGL MLNTLRTAIY VNPGVAALPG VMIFAVSICF NMLSDGLRSA MDIRN