Gene Xaut_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3253 
Symbol 
ID5421475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3609635 
End bp3611266 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content66% 
IMG OID640882499 
Producthypothetical protein 
Protein accessionYP_001418139 
Protein GI154247181 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.717956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT TCGACATGAT GAAGGTGTAT GGCCGGGTGG CGGAGATCTA TCGCCTGCGC 
CTCGGCGAGG CGGTCTCGGC CTACGGCGTG GCCATGCGGG GCGCGGCGAG CGCCTTTGCC
GCCGCCTGCC GCCCGCAGGA TCCGGCGAGC GCCTGGCGCG ACACGGTCTC CTACACGTTC
GACGCGGCCC AGCGGTCCCT CATCTTCTGG GACACCATGC GCCAGCGCGG CAACAACTGG
ATCGCTCACG AGAAAGCCGG CAAGCCGCCG CTGCTGGCCT TCGATTATGA GACCGTCGCC
GACGCGCGCA CCTTCGCGCG CCCCGCCAAC TACGCCCTGG TGCGCATCCT GCCGCCGGCG
GGCGTGACGC TCGATCCCGA CAAGCGACCG TTCCTGATCA TCGATCCGCG CGCCGGCCAC
GGGCCGGGCA TCGGTGGCTT CAAGGCGGAT TCGGAGGTCG GCTTCGCAAT GAAGGCCGGG
CATGCGGTGT ACATGGTCAT CTTCTTCCCC GAGCCGGTGC CGGGGCAGAC GCTGGCGGAC
GTGTCGCTGG CGGAGGCGGA GTTGGTGCGC ATCGTGCGCG GGCGCCATCC CACCTGCGAC
AAGCCGGTGG TGATGGGCAA TTGCCAGGGC GGATGGGCCG CCATGCTGGT GGCGGCGCTG
GATCCCGACA ATGTGGGTCC CATCGTGGTG AATGGCGCGC CCATGTCCTA CTGGGCCGGC
AACGACGCCG AGAACCCCAT GCGCTACGCC GGCGGCGTGC TCGGCGGCGC GTGGACGGCC
TCGCTGGCCG CGGACCTCGG TGGCGGGGTC TTCGACGGCG CCTACCTGGT GGACAATTTC
GAGTATCTGA ACCCGGCCAA CACCTATTTC GGCAAGTATT ACACCCTCTA TTCCCGCATC
GACACCGAGC CGGCGCGTTT CCTGGAATTC GAGCGCTGGT GGGGCGGCTA CTTCCTGATG
AACCGGGAAG AGATCAAGTG GATCGTCGAG AACCTGTTCG TCGGCAACAA GCTGGCCGCG
GGCAAAGCGG AATGGGCGCC GGGCAAGACC TTCGACCTGA AGGCGGTGCG CTCGCCCATC
ATCGTCTTCG CCTCGCTGGG CGACAACATC ACGCCGCCGC AGCAGGCCAT CAACTGGGTT
GCCGATCTCT ATCCCACCAC GCAGGCCCTC AAGAATGCCG GGCAGGTGGT GGTGGGTCTG
ATGCACCAGA GCGTCGGTCA CCTGGGTATC TTCGTCTCCG GCGCGGTGGC GAGGCGCGAG
CATGCGCAGA TCGTCGATCT CATCGAGCAT GTGGAAGGGC TGGCTCCCGG CCTCTATGGC
ATGACCATCG AGGAGGGTCA TTCCGGCGCC GAAGTGAAAT ATGACGTGAC GCTCACCGAG
CTGAGGGTGG AAGACCTCGC CGTGCTGCAG AAATACAGCC GCAAGGATGA GATCCCGTTC
GAGGTGGTGG CGAATGTGTC GCAGGTCAAT GCGCGGGCCT ACGAGACCTT CGTGCATCCT
GTCCTCTCGG CGGTGGTGAC GCCGGAGATG GGGCGGGCGC TGAGGGCGGT GCATCCGCTG
CGGTTGGCAC GCTGGGGCCT CTCCGACCTT AACCCACATT TCCCAAGTAA GGCGCTGATT
TCGCTGTCCT GA
 
Protein sequence
MNPFDMMKVY GRVAEIYRLR LGEAVSAYGV AMRGAASAFA AACRPQDPAS AWRDTVSYTF 
DAAQRSLIFW DTMRQRGNNW IAHEKAGKPP LLAFDYETVA DARTFARPAN YALVRILPPA
GVTLDPDKRP FLIIDPRAGH GPGIGGFKAD SEVGFAMKAG HAVYMVIFFP EPVPGQTLAD
VSLAEAELVR IVRGRHPTCD KPVVMGNCQG GWAAMLVAAL DPDNVGPIVV NGAPMSYWAG
NDAENPMRYA GGVLGGAWTA SLAADLGGGV FDGAYLVDNF EYLNPANTYF GKYYTLYSRI
DTEPARFLEF ERWWGGYFLM NREEIKWIVE NLFVGNKLAA GKAEWAPGKT FDLKAVRSPI
IVFASLGDNI TPPQQAINWV ADLYPTTQAL KNAGQVVVGL MHQSVGHLGI FVSGAVARRE
HAQIVDLIEH VEGLAPGLYG MTIEEGHSGA EVKYDVTLTE LRVEDLAVLQ KYSRKDEIPF
EVVANVSQVN ARAYETFVHP VLSAVVTPEM GRALRAVHPL RLARWGLSDL NPHFPSKALI
SLS