12 homologs were found in PanDaTox collection
for query gene Xaut_3182 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_3182  hypothetical protein  100 
 
 
195 aa  397  9.999999999999999e-111  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0370737 
 
 
-
 
NC_011666  Msil_3607  hypothetical protein  47.21 
 
 
195 aa  175  3e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  0.532303 
 
 
-
 
NC_010524  Lcho_0170  hypothetical protein  42.78 
 
 
197 aa  139  1.9999999999999998e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_5965  hypothetical protein  43.59 
 
 
202 aa  133  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.070499 
 
 
-
 
NC_012858  Rleg_6581  hypothetical protein  39.11 
 
 
201 aa  128  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.483477  normal  0.0422786 
 
 
-
 
NC_011366  Rleg2_5645  hypothetical protein  39.29 
 
 
201 aa  127  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3312  hypothetical protein  38 
 
 
201 aa  123  2e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0440  hypothetical protein  36.46 
 
 
199 aa  118  6e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.465287 
 
 
-
 
NC_009439  Pmen_3453  hypothetical protein  33.11 
 
 
175 aa  68.6  0.00000000006  Pseudomonas mendocina ymp  Bacteria  normal  0.346082  normal  0.520774 
 
 
-
 
NC_013441  Gbro_4813  hypothetical protein  30.17 
 
 
202 aa  59.3  0.00000003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2622  hypothetical protein  33.98 
 
 
208 aa  56.2  0.0000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3959  hypothetical protein  33.01 
 
 
181 aa  51.6  0.000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
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