| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2881 |
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| Symbol | |
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| ID | 5420774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3205522 |
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| End bp | 3207960 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640882135 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001417777 |
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| Protein GI | 154246819 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.244722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.034415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCACC TTGCCGAATA TCGCCGAACC TCAACCCGTC TCGCGGACTT CCTGCCCTGG
GCCGCGCTCG TCGGCGAGGG CATCGTCCTC AACAAGGACG GCAGCTACCA ACGCACCGCC
CGCTTTCGCG GTCCCGACCT CGACTCCGCG GTGCCGGCCG AGCTCGTCGC CGTGGCCGGC
CGGCTCAACA ATGCTTTCCG CCGGCTCGGC TCGGGATGGG CGATTTTCGT CGAGGCCCAG
CGCCATGGCG CCGGCACCTA TCCGGCGAGC CGCTTTCCCG ATGCCGCGTC GGCTCTGGTC
GACGCCGAAC GCAAGGCCGA TTTCGAGGAA GACGCCTCGC ACTTCGAGTC GAGCTACTTC
CTGACCTTCG TCTACCTGCC GCCGGCCGAG GACGCCGCCC GCGCCGAAAG CTGGCTCTAT
GAAGGCAAGG CCGATAACGG TCTCGACCCT CGTGAGGCGT TGCGCGGCTT CGCCGATCGC
ACCGACCGCG TGCTCCAGCT CATCGAGAAC TTCATGCCGG AATGCGCATG GCTCGATGGC
GGCGAGACGC TGACCTATCT GCATTCGACC GTCTCGACCA AACGCCACCG CGTGCGTGTG
CCCGAGACGC CGATGTATCT CGACGCGTTG CTGGCCGATC AACCGCTCAC CGGCGGACTG
GAGCCGCGGC TCGGCGACGC GCATCTCCGC ATCCTTACCA TTGTCGGTTT TCCGACCGCG
ACCACGCCCG GGCTGCTCGA CGACCTCAAC CGGCTCGCCT TTCCCTATCG CTGGTCGACA
CGCGCCGTCC TACTGGACAA GACCGACGCC ACCAAGCTGC TAACCAAGAT ACGGCGGCAG
TGGTTCGCCA AGCGCAAGAG CATCATGGCG ATCCTCAAGG AGGTGATGAC CAACGAGGCT
TCGGTGCTCG TCGACACCGA TGCGGCGAAC AAGGCGGCCG ATGCCGACCT CGCGCTCCAG
GAACTCGGCG CGGACTATGC GGGTCAGGCC TATGTCACCG CGACGGTCGC TGTCTGGGAC
GCCGATCCAC GCATCGCAGC CGAGAAGCTC CGGTTGGTGG AGAAGATCGT TCAAGGCCGC
GACTTCACCG CGATGGCGGA AACGATCAAC GCCGTCGACG CCTGGCTTGG CTCGCTGCCG
GGCCATGTCT ACGCCAACGT CCGGCAGCCG CCGATCTCGA CGCTCAATCT CGCCCATATG
ATTCCGCTGT CGGCGGTGTG GGCGGGGCCG GAACGGGACG AGCATTTCGG GCAACCCCCC
TTGCTCTACG GCAGGACCGA AGGCTCGACC CCGTTCCGGT TTTCCCTTCA TGTCGGCGAT
GTCGGTCACA CGCTCGTCGT CGGGCCGACC GGCGCCGGCA AATCGGTGCT CCTGGCGCTG
ATGGCGCTGC AGTTCCGGCG CTATCCCGGC TCCCAGGTCT TCGCCTTCGA CTTCGGCGGA
AGCATCCGAG CTGCAGCGCT CGCGATGGGC GGCGACTGGC ACGATCTCGG CGGCGGCCTG
ACAGAAGGCG CGGCTGACAG CGTCTCGCTG CAACCGCTCG CCGGCATCCA CCACGTGCCG
GAGCGCGCGT GGGCGGCTGA TTGGATCGTC GCGATCTTGC AGCGCGAGGG CGTGACGATC
GCGCCAGAGG TGAAGGAATA CATCTGGACG GCGCTGACCT CGCTGGCGAG CGCGCCCGTC
GTCGAGCGCA CCCTGACCGG ACTCGCCGTC CTCCTTCAAT CGAACGATCT CAAACAGGCG
CTGCGGCCCT ATTGCGTCGG GGGCGCCTAT GGCCGGCTGC TCGACGCCGA GAGCGAGCAT
CTTGGCGAAG CCGTTGTGCA GGCGTTCGAG ACCGAGGGCC TGATCGGCAC GGCCGCCGCG
CCGGCCGTGC TCGCCTATCT CTTCCACCGC ATCGAGGACC GCCTCGACGG CAGCCCAACG
CTGCTCATCG TCGACGAAGG CTGGCTGGCG CTCGATGACG AGGATTTCGC CGGCCAGCTC
CGCGAGTGGT TGAAGACGCT CCGCAAGAAG AACGCGTCCG TCGTCTTCGC CACCCAATCG
CTCTCCGACA TCGACAGTTC TGCGATCGCG CCGGCCATTG TCGAGAGCTG CCAGACGCGG
CTGCTGTTAC CGAACGAGCG CGCGATCGAA CCGCAGATCA CCGCGATCTA CCGCCGCTTC
GGGCTCAACG ATCGCCAGAT CGAGATCCTC GCCCGCGCGA TGCCGAAGCG CGACTACTAC
TGCCAATCCC GCCGAGGCAA CCGACTCTTC GAACTCGGTC TGTCCGACGT GGCGTTGGCG
CTCTGCGCCG CCTCCTCAAA AACCGATCAG GCGGCGATCG AGCGCGTCAT CGCAGAGCAC
GGCCGCGAAG GTTTCCTGCC GGCCTGGCTG CGTCTGCGCG GCGTCGCCTG GGCCGCCGAC
CTCATCCCCA ACCTCAATAA CCTGGAGACC CAGCCATGA
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| Protein sequence | MMHLAEYRRT STRLADFLPW AALVGEGIVL NKDGSYQRTA RFRGPDLDSA VPAELVAVAG
RLNNAFRRLG SGWAIFVEAQ RHGAGTYPAS RFPDAASALV DAERKADFEE DASHFESSYF
LTFVYLPPAE DAARAESWLY EGKADNGLDP REALRGFADR TDRVLQLIEN FMPECAWLDG
GETLTYLHST VSTKRHRVRV PETPMYLDAL LADQPLTGGL EPRLGDAHLR ILTIVGFPTA
TTPGLLDDLN RLAFPYRWST RAVLLDKTDA TKLLTKIRRQ WFAKRKSIMA ILKEVMTNEA
SVLVDTDAAN KAADADLALQ ELGADYAGQA YVTATVAVWD ADPRIAAEKL RLVEKIVQGR
DFTAMAETIN AVDAWLGSLP GHVYANVRQP PISTLNLAHM IPLSAVWAGP ERDEHFGQPP
LLYGRTEGST PFRFSLHVGD VGHTLVVGPT GAGKSVLLAL MALQFRRYPG SQVFAFDFGG
SIRAAALAMG GDWHDLGGGL TEGAADSVSL QPLAGIHHVP ERAWAADWIV AILQREGVTI
APEVKEYIWT ALTSLASAPV VERTLTGLAV LLQSNDLKQA LRPYCVGGAY GRLLDAESEH
LGEAVVQAFE TEGLIGTAAA PAVLAYLFHR IEDRLDGSPT LLIVDEGWLA LDDEDFAGQL
REWLKTLRKK NASVVFATQS LSDIDSSAIA PAIVESCQTR LLLPNERAIE PQITAIYRRF
GLNDRQIEIL ARAMPKRDYY CQSRRGNRLF ELGLSDVALA LCAASSKTDQ AAIERVIAEH
GREGFLPAWL RLRGVAWAAD LIPNLNNLET QP
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