| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2701 |
|---|
| Symbol | |
|---|
| ID | 5423659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2989478 |
|---|
| End bp | 2991277 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640881955 |
|---|
| Product | putative FAD-binding dehydrogenase |
|---|
| Protein accession | YP_001417599 |
|---|
| Protein GI | 154246641 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.302749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.211864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC ATCCGGGCCC CATCGCGCCC TCCGGCGCCG CACGCAATCA CCCGACGAGA
ACCTACGACC TCGTGGTGAT TGGCTCGGGA GCGGGTGGCC TCGCCACCGC CGTCACCGCC
GCTCTCCTCG GCCTTGAGGT GGTCGTGGTG GAGAAGGATG CCAAGATCGG CGGCACCACC
GCCTGGTCCG GCGGATGGAT GTGGATCCCG CGCAATCCGC TGGCTGTGGA GGCCGGGATC
GTCGAGGACA TCAAGGCGCC GCGCACCTAT CTGAAGGCCG AGCTGGGCAA TGCCTATGAC
GAGGCCCTGG CCACCATGCT GCTGGAGCAG GGTCCGCGCA TGGTGGACTT CTTCCGCCGC
AACACCAGCC TCGCCTTCGT GGACGGCAAC GCCGTTCCCG ATTTTCACGA CACCTCGCCC
GGTGCGGCCA AGGGCGGGCG CTCGCTGTGC GCGGCGCCGT TCGACGGACG GCTGCTCGGC
GCGCGCATTT GCGACCTGCG CGCGCCCCTT GACCTCATCT CGCCCTTCGG GATGGGCATC
GCCTCAGGGC GCGACATGCT CCATTTCCTG GAGGCCACGC GCAATGCCTC CTCCTTCACC
CATGCCGCCG GGCGCATCCT GCGCCATTTC ATCGACGTGG CGCGCCACGG CCGCGGCATG
AAGCTGGTCA ACGGCAACGC CCTCATCGCC CGCCTGCTGA AATCGGCCGA CGATCTGGGC
GTGACCATCC TGACCTCGTG CCCGGCCAGC GAGGTGCTGG TGGAAGAAGG GCGCGTGGCG
GGCATCATCG CGGGCTCCGG AGAAACGCTG CATGAGATCC ACGCCCGGCG CGGCGTGGTG
CTGGCGAGCG GCGGCTTTCC CCATGACCTC GCTCGCAAGG CGGCGCTGTT TCCCCACGCA
CCGACCGGCC GCGAGCACTG GTCGGCGGCG CCGCAGACCA ACAGCGGCGA CGGCATTCGT
CTGGGGGAGG CCGCTGGCGG CTGCTTGCGT ACGGACCTCT CGGACGCCGG CGCCTGGGCA
CCGGTGTCGC TGGTCCCACA GGCCAGTGGC ACCCCGGCGT CCTATCCCCA CCTCGTCGAA
CGCGCGAAGC CCGGCCTCAT CATGGTGCGC GCGGACGGGC AACGTTTCAC CAACGAAGCC
GATTCCTACC ACGACGTGAT GCGCGCGCTA CTGGCGGCAA CGCCCCCTGG CGCGCCCGTG
GAAGCCTGGA TGATCTGCGA TCATGCCTTC CAGCGCCACT ACGGCCTCGG CCGCACGCGG
CCCCGGCCGT TCCCGCTGCG CCCGTGGCTC GCCAGTGGAT ATCTGAAGCG CGGCAACAGC
TTCGCCGAGC TGGCCCGCGC CTGCGGCATC GATGCCGACG GGCTGGAACA GACCCTTGCG
GATTATAACC GCGCCGCCGC GCGCGGCGAG GACCCCGCCT TCGGCCGCGG CTCCAGCCTC
TACAACCGGG TGCAGGGCGA CGCGGCGCAC CGGCCCAATC CCTGCGTCGC GCCCATCGCC
CGCGGACCGT TTTATGCGGT GAAGGTGGTG GCCGGCAGCC TCGGCACCTT CGCCGGCCTC
GCCACCGACG CCCATGCCCG GGTGCTGGAC GCTTCGGGCA GCCCCATCGC CGGCCTCTAT
GCGGTGGGCA ACGACATGTC GAGCATGATG GGCGGGCGCT ATCCGGCGGG CGGCATCACC
CTCGGCCCGG CCATGACCTT CGGCTTCGTC GCCGCGCACC ACGCCAGCGG CACCCCCCTT
CCTTCCGACA CCATCGACCG CGGACAGCCG CGTCCGCCCG GAGAGTCCCA TGCGTTATGA
|
|---|
| Protein sequence | MNPHPGPIAP SGAARNHPTR TYDLVVIGSG AGGLATAVTA ALLGLEVVVV EKDAKIGGTT
AWSGGWMWIP RNPLAVEAGI VEDIKAPRTY LKAELGNAYD EALATMLLEQ GPRMVDFFRR
NTSLAFVDGN AVPDFHDTSP GAAKGGRSLC AAPFDGRLLG ARICDLRAPL DLISPFGMGI
ASGRDMLHFL EATRNASSFT HAAGRILRHF IDVARHGRGM KLVNGNALIA RLLKSADDLG
VTILTSCPAS EVLVEEGRVA GIIAGSGETL HEIHARRGVV LASGGFPHDL ARKAALFPHA
PTGREHWSAA PQTNSGDGIR LGEAAGGCLR TDLSDAGAWA PVSLVPQASG TPASYPHLVE
RAKPGLIMVR ADGQRFTNEA DSYHDVMRAL LAATPPGAPV EAWMICDHAF QRHYGLGRTR
PRPFPLRPWL ASGYLKRGNS FAELARACGI DADGLEQTLA DYNRAAARGE DPAFGRGSSL
YNRVQGDAAH RPNPCVAPIA RGPFYAVKVV AGSLGTFAGL ATDAHARVLD ASGSPIAGLY
AVGNDMSSMM GGRYPAGGIT LGPAMTFGFV AAHHASGTPL PSDTIDRGQP RPPGESHAL
|
|---|
| |