Gene Xaut_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2662 
Symbol 
ID5423131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2954796 
End bp2955302 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content61% 
IMG OID640881916 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001417560 
Protein GI154246602 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.396888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGAGA TCGCCAAGCT GATCGAACCG CAGATTCCTG CCTTGCGCAG GTACGCCTAC 
GCGCTCGTCC GTGACCATGA CGCCGCCGAC GACCTGGTGC AGGACTGTCT TGAGCGGGCC
GTGTCGCGCT GGTATCTGCG CCGCGACGAC GGTCACCTGC GGGCCTGGCT GTTCACGATG
CTTCGAAATC TCTACATCAA TTCCTATCAT CGACAGAAGC GTCGGGGCAC TCGCGTTCGT
CTCGACGAGT CGATAATGCC GAGCGTGGCA CCAAACCAGA CCGATCAGCT GGAGATGAAC
GACGTTCTAT CGGCGCTCGA AAGGCTGCCC GAGGATCATA AGTCGATCCT TCTGCTGATC
GGGGTCGAGG ACCTGTCCTA TGAGGAGACG GCGAGAGTGC TTTCGGTGCC GGTCGGCACC
GTCATGTCTC GCCTGTCTCG TGCGCGACAA GGACTGCGCG CATTGCTGAG CGGTTCGCGC
GTAACCCCGC TTCGGAGGGT CAAATGA
 
Protein sequence
MDEIAKLIEP QIPALRRYAY ALVRDHDAAD DLVQDCLERA VSRWYLRRDD GHLRAWLFTM 
LRNLYINSYH RQKRRGTRVR LDESIMPSVA PNQTDQLEMN DVLSALERLP EDHKSILLLI
GVEDLSYEET ARVLSVPVGT VMSRLSRARQ GLRALLSGSR VTPLRRVK