| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2562 |
|---|
| Symbol | |
|---|
| ID | 5425061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2854947 |
|---|
| End bp | 2855354 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640881816 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001417461 |
|---|
| Protein GI | 154246503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.828362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG TCTTCATCGA CAGCAACATC CTGCTCGACG TGCTCACCGA GGACCCGCAG
TGGTTCTCCT GGTCCAGCGC CGCGCTGGCC GAGGCGGCGG ACCGGCACCG CCTCGTCATC
AATGCGGTGG TCTATGCGGA AGTCTCGGTG CGCTTCTCGC GTATCGAGGA TCTGGAAGCT
GCTTTGCCGG CGCAGCTGAT CGAGCGCGAG CCCATTCCCT TTGAGGCGGC GTTCCTCGCG
GGCAAATGCT TCCGCGCCTA CCGCCAGCGT GGTGGCGCCC GCACCTCGCC GCTCCCCGAC
TTCTTCATAG GCGCCCATGC TGCAGTCGCC GGCTACGACC TCCTGACCCG CGATGCGGGG
CGCTACGGGA CGTATTTTCC GAAGGTGAGG GTGATCGGGC CGGGGTGA
|
|---|
| Protein sequence | MGTVFIDSNI LLDVLTEDPQ WFSWSSAALA EAADRHRLVI NAVVYAEVSV RFSRIEDLEA
ALPAQLIERE PIPFEAAFLA GKCFRAYRQR GGARTSPLPD FFIGAHAAVA GYDLLTRDAG
RYGTYFPKVR VIGPG
|
|---|
| |