| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2408 |
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| Symbol | |
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| ID | 5424832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2686898 |
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| End bp | 2688181 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640881661 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001417307 |
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| Protein GI | 154246349 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.349304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGGC CCTGGCGCAA AGGGGGCGTC CCGCGTGCGG GCGCTCGAAG GCAAAGAATG
TCCGAGGGAC GCCTTTATCT CCTGGCCGGC CCGGCCGTCT CGCTCGTTGT CGCCTGCGTC
TTTCTCCTGG TCTGGCTGCA CCACCGCAAG CGGTCCTACG TGCCGTTCTT CGCCGTGGCG
TTCTGCGCCT ATGCCATGGC CGCGCTGTCG CAGCTGTTCC AGATCCCGGC AGGTGTCGGG
CTCAATACCA TGGTCTCGGG CCTGGTCTAC ACGTTCGGCA TCTTCTGCCT TGTGCAAGGA
GTGCTGGCGC GGTTCGGCAA GGCAGGCGCC GCCCCGGTGC TGGCGGCCGT CTCCGTGGCG
ATCCTCGGGC TGCTGTACTA CTTCATGTAT GTGGACCGGA GCCTCGTGGC CCGGATCTAC
GTGCAGAATT TCGGCTACGG CGTGATGTTC CTGTTTGCCG CGGTCGAGAT CTTCGGGGCC
AGTGGCCGGC GGAAGGTGGA CCGGATCCTG TTCTGGGTTT TCCTGCTGTT CGGCCTCCAT
TTCTTCGTGC GCACCGTGCT CACCCTGTCC ATCTCGCCCG ACCTGTTCGC GCTCGATCGG
ATGCGTACCG AGGGCGCCGA TGCGCGGACC ATCGGCCTGC TGTTCCGCCG CTCGCCGTTC
TGGCAGGTGC TTAACTTCTC GCTTCTGGTT AGCGGCCTGC TGGTGGCGCT CGCCCTGCTT
GGCGCCATCG CCGTCGATGC CATGGACGAG CTGGAGCGGC AGGGCCGCAT CGACCCCCTG
ACCGGGCTCG CCAACCGCCG CGGCTTCGAC GATCTCGCCC AGGAGCTCAT CGCCGACAAG
ACGAGCCATC CCCAGAGCCT GGTCTATTTC GACATCGACC GCTTCAAGGG CATCAACGAC
GGTTTCGGCC ATGCGACCGG GGACCTGGTG CTTGCCACCG TCGGCGGCCT CGTCGCCCGC
GTGGTGATGC CGCGAGACGT GGCGGCCCGC CGCGGCGGCG AGGAGTTCGT GGTGCTGCTG
GCCAGCACCA GCGCCCGCAG CGCGTTCCAC TTCGCCGAGC GGATGCGCGC CGAGCTGCGG
CGCACCTCGT TCCCCATGCT GCCGCCGGGC GCCGTCGTCA CCGCGAGCTT CGGCGTCGCC
GAGCGCAGGC CCGACGAGGA CCTGGCGGAC CTGCTCCACC GCGCCGACCA GCTGGTCTAT
GCCGCCAAGC ACGCCGGCCG GGATCTTGTC CTCACCGACG ACGGCGTGCT GGCGGTGCCG
GTGGTGGGGC AGGGCGCCGG TTGA
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| Protein sequence | MRRPWRKGGV PRAGARRQRM SEGRLYLLAG PAVSLVVACV FLLVWLHHRK RSYVPFFAVA
FCAYAMAALS QLFQIPAGVG LNTMVSGLVY TFGIFCLVQG VLARFGKAGA APVLAAVSVA
ILGLLYYFMY VDRSLVARIY VQNFGYGVMF LFAAVEIFGA SGRRKVDRIL FWVFLLFGLH
FFVRTVLTLS ISPDLFALDR MRTEGADART IGLLFRRSPF WQVLNFSLLV SGLLVALALL
GAIAVDAMDE LERQGRIDPL TGLANRRGFD DLAQELIADK TSHPQSLVYF DIDRFKGIND
GFGHATGDLV LATVGGLVAR VVMPRDVAAR RGGEEFVVLL ASTSARSAFH FAERMRAELR
RTSFPMLPPG AVVTASFGVA ERRPDEDLAD LLHRADQLVY AAKHAGRDLV LTDDGVLAVP
VVGQGAG
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