Gene Xaut_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2401 
Symbol 
ID5423870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2679368 
End bp2680072 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID640881654 
Productcolicin V production protein 
Protein accessionYP_001417300 
Protein GI154246342 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGA CTTTGCTCGA CATCATCGTT CTGACGGTCA TGCTGATTTC GGGGCTGCTG 
GCCATGGTCC GCGGCTTCCT GCGCGAGGTC TTCTCCATCC TCTCATGGGT GGTTGCAGCC
GGCGTCACCG TGTATTTCCA GAAGCAGCTC CTGCCGGTGG TGAAGCAATA CATCGCCCAG
GATACGGCAG CTCTTGCCGT CACGGTTGCG GTGCTGTTCC TCGGCACGCT TCTGCTTGCG
ACGATCATCA CGGCGCGCAT CTCCGACGTG GTGCTCGACA GCCGAATCGG CGCGCTGGAC
CGCACGCTGG GCTTCATGTT CGGGCTGGCG CGCGGCCTGC TCCTCATGGT GATCGCCATG
CTGTTCTTCA ACTGGCTGGT GCCGCCGGAG AAGCTGCCGC CGTGGGTCGC CAATGCAAAA
TCGCTCCCCG CCATCAAGAG CGCGGGGGAG TGGCTTAAGG CGCAGTTGCC GGATGACCCT
GAAAACACCA TCTTGAACAA GTTGAAGAAG CCGCCCGCCG GAGAGGAGGG CGACACGCCC
GCCGCCCCGG CCGCCCCGAC GGGGGGGCAG CGTTCGGATT TGGGGGGCAC CACAAGACCA
GCCGGGTCGG CTGACGCATC CGTTGCGGGG GTTAAGTCCT ACCGCCCCAC GGAACGCCAG
GGCCTCGACC AGCTCGTCGC CAGCACGCGC GGCACCGGCC AGTAA
 
Protein sequence
MPVTLLDIIV LTVMLISGLL AMVRGFLREV FSILSWVVAA GVTVYFQKQL LPVVKQYIAQ 
DTAALAVTVA VLFLGTLLLA TIITARISDV VLDSRIGALD RTLGFMFGLA RGLLLMVIAM
LFFNWLVPPE KLPPWVANAK SLPAIKSAGE WLKAQLPDDP ENTILNKLKK PPAGEEGDTP
AAPAAPTGGQ RSDLGGTTRP AGSADASVAG VKSYRPTERQ GLDQLVASTR GTGQ