| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2166 |
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| Symbol | |
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| ID | 5424471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2424975 |
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| End bp | 2427317 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640881418 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001417067 |
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| Protein GI | 154246109 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.897398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.40683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCG CCGCACCGCA GGGAATGAGC GAGACCATCG CCCGCATCAT CGCCGCCGAG
ATCAGCGCCC GGCCGGCGCA GGTCAGCGCG GCCGTGTCCC TCATCGACGA AGGCGCCACG
GTTCCCTTCA TCGCCCGCTA CCGCAAGGAG GTCACGGGCG GCCTCGACGA CACCCAGCTG
CGCACCCTGG AAGAACGCCT GTCCTACCTG CGCGAGCTGG AGGCGCGGCG CGCCGCCGTG
CTGTCCTCCA TCGACGGGCA GGGCAAGCTT TCCGACGAAT TGCGCGGCAA GATCGACGCC
GCCACCACCA AGGCGGAGCT GGAGGACCTC TACCTCCCCT ACAAGCCTAA GCGACGCACC
AAGGCGGAGA TCGCCCGCGA GAAGGGGCTG GGGCCGCTGG CCGAGGCCCT CCTCGCCGAC
CGGTCCGTCG CCCCCGCCGA GCGCGCGGCG GCGTACCTCA ACGAGCAGGT GGTAGACATC
AAGGCGGCGC TGGACGGCGC CCGCGACATC CTGGTGGAGA CTTTCGCGGA GAATGCGGAA
CTGGTGGGCC GCCTGCGCGC GCATCTGAAG GCCAATGCCG TGCTTAAGGC CAGGGTGGCC
GAGGGCAAGG AGGAGGCGGG CGCCAAGTTC CGTGACTATT TCGACCATTC GGAAAAATGG
GCCACCGCCC CCAGCCACCG CGTGCTCGCC ATGCTGCGCG GCCGCAACGA AGAGACGCTG
ACGCTGGACC TGGTGGTGGA CGAGGACGCC ACCACCCCGG TGAAGCCCGC CGAGCGCATC
GTGGCGGAAG CCTTCGCCAT TCCTCTGGCC AACGGCGCGC CCGCCGATGG CTTCCTGCTG
GAGGTGGCCC GCTGGGCATG GCGGGTGAAG CTCTCGCTCC ACCTCACCGT GGAACTGATG
GGCGAGATGC GCGAGCGGGC GGAGGAAGAA GCCATCCGCG TGTTCGCCCG CAACCTCAAG
GACCTGCTGC TGGCCGCCCC CGCCGGATCG CGCGCCACCA TGGGGCTCGA CCCCGGCATC
CGCACCGGCG TGAAGGTGGC GGTGGTGGAC GGCACCGGCA AGCTCATTGC CACCTCTACC
GTCTATCCCT TCCAGCCGCG CAACGACGTG CAGGGGGCGA GCGCCACGCT GGCCCATCTC
ATCCGGCAGC ACAAGGTGGA GCTGATCGCC ATCGGCAACG GCACCGCGAG CCGCGAGACC
GACAAGCTGG TGGCGGATCT CCTTGGCATG CTGCCGCCAC CCCACCCCAT CAAGGTGGTG
GTGAGCGAGG CCGGCGCCTC GGTCTATTCC GCCTCCGCCA CCGCCGCGGC CGAAATGCCG
GACATCGACG TGTCGATCCG CGGCGCCGTC TCCATCGCCC GCCGCCTGCA GGACCCGCTG
GCGGAGTTGG TGAAGATCGA GCCCAAGGCC ATCGGGGTGG GCCAATACCA GCACGACGTG
GATCAGGCCC GCCTCGCCAA GGCCCTCGAC GCGGTGGTGG AGGATGCGGT GAACGCCGTG
GGCGTGGATC TCAACACCGC CTCCGCCTCG CTGCTGGCGC GGGTGTCGGG CCTCGGCGCC
TCGCTGGCGG AGGCCATCGT GGCCCATCGC AATACGGTGG GGCCGTTCAA GACCCGCAAG
GAGTTGCTGA AGGTTGCGCG CCTCGGGCCA AGGACGTTCG AGCTGTCCGC GGGCTTCCTG
CGCATCGCCG AGGGGACCGA GCCGCTGGAT GCCTCCGCCG TGCATCCGGA AGCCTATGAC
CTCGCCAAGA AGATCGTCGC CGCCTGTGGG CGAGACGTGC GCGCCCTCAT GGGCGACACG
GCGGCGCTGA AGGCGCTGGA CCCGCGTGCC TTCGTGGACG AGCGCTTCGG CCTGCCCACG
GTGCGCGACA TTCTCAGCGA GCTGGAGAAA CCCGGCCGCG ACCCTCGCCC GCAGTTCAAG
ACCGCCACCT TCGCCGAGGG GGTCAACGAG ATGAGCGACC TCAAGCCCGG CATGGTTCTG
GAAGGCACGG TGACCAATGT GGCCGCCTTT GGCGCCTTCG TGGACATCGG CGTGCACCAG
GACGGGCTGG TCCACGTCTC GGCGCTGGCC GACCGGTTCG TGAAGGACCC CCACGAGGTG
GTGAAGGCCG GCGACGTGGT GAAGGTGCGG GTGGTGGAAG TGGATGTGAA GCGCAAGCGC
ATCGCCCTCT CCATGCGCAA GGACGATGCG GGCGGGCGGC CCCCCGCCGG CCGTCCCCAG
GACCAGCGCC CGAATGAGCC GCGCCAGAAC GACGCCCGCC GGAGCCCACC GCCGAAGGAC
AAGCCCGCCC AGGGCGCGTT CGGCGCTGCC CTCGCCGACG CCCTGCGGCG CAAGGGCCAG
TAG
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| Protein sequence | MAAAAPQGMS ETIARIIAAE ISARPAQVSA AVSLIDEGAT VPFIARYRKE VTGGLDDTQL
RTLEERLSYL RELEARRAAV LSSIDGQGKL SDELRGKIDA ATTKAELEDL YLPYKPKRRT
KAEIAREKGL GPLAEALLAD RSVAPAERAA AYLNEQVVDI KAALDGARDI LVETFAENAE
LVGRLRAHLK ANAVLKARVA EGKEEAGAKF RDYFDHSEKW ATAPSHRVLA MLRGRNEETL
TLDLVVDEDA TTPVKPAERI VAEAFAIPLA NGAPADGFLL EVARWAWRVK LSLHLTVELM
GEMRERAEEE AIRVFARNLK DLLLAAPAGS RATMGLDPGI RTGVKVAVVD GTGKLIATST
VYPFQPRNDV QGASATLAHL IRQHKVELIA IGNGTASRET DKLVADLLGM LPPPHPIKVV
VSEAGASVYS ASATAAAEMP DIDVSIRGAV SIARRLQDPL AELVKIEPKA IGVGQYQHDV
DQARLAKALD AVVEDAVNAV GVDLNTASAS LLARVSGLGA SLAEAIVAHR NTVGPFKTRK
ELLKVARLGP RTFELSAGFL RIAEGTEPLD ASAVHPEAYD LAKKIVAACG RDVRALMGDT
AALKALDPRA FVDERFGLPT VRDILSELEK PGRDPRPQFK TATFAEGVNE MSDLKPGMVL
EGTVTNVAAF GAFVDIGVHQ DGLVHVSALA DRFVKDPHEV VKAGDVVKVR VVEVDVKRKR
IALSMRKDDA GGRPPAGRPQ DQRPNEPRQN DARRSPPPKD KPAQGAFGAA LADALRRKGQ
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