Gene Xaut_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2006 
Symbol 
ID5421635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2261503 
End bp2262966 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content73% 
IMG OID640881258 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001416907 
Protein GI154245949 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCA CCCGCCATCT CGCCCGCCAC GGCGCCGAGC GCCCCGACGC GCCGGCCCTG 
ACCTGCGAGG GCGAAAGCCT CACCTATGGC TCCCTCGCCG CGCTGGTGCA GCGCATCGCC
GCCCGGTTCA GGGACGCGCC GGACGGCGGC ATCGCGCTCG ACCTGCCCAA TGGGGCGGCG
CTGGCGGCGC TGTTCCTCGC CGCCGCCCAT GCGGGACGGG AGGGGCAGGT GCTCGACCCC
GCCTGGCCGG TGGGGCAGCG GGCGGACATC CTCGCCCGCA TCCGGCCGGG GCTGCTGGTG
TCGTGCGGTG CCGACGCGGA TGTGCGCCTG TCCCCGGCCC AGGGACTGGC GGGCCTTGCC
GAGGCCATGG GCGCCGGCGC GGCGGAGGTG ACCGGGGCGC CGGACCCGGA CCTGCCCTTC
TATGTGGGCT TCACCTCCGG CTCCACCGGC CTGCCCAAGG GCTATCGCCG CGCCCACCGC
TCCTGGACCG AGAGCTTCGA TGCCGACACC CGCGAATTCG GCATCGGCCC CGATGACGTG
GTGCTGGCGC CGGGGGCGCT CACCCATTCC CTTTTCCTCT ATGCGCTGGC GCGGGGCCTC
GATGCCGGTG CCCATGTGAT CCTGTCGAAG AGCTTCCGCC CCCGCGCGGT GGCGGAGCTG
GCGCGCCGGC ACACGGCCAG CGTGCTCTAT GGCGTGCCCA CCCAGCTCGC CTTGCTGCTG
GATCATCTTG CGGCGGAGGG CGCGCGGCTG GACGGCATCC GCCTCGTGCT GTGCTCGGGC
GCCAAATGGC CGGCGGGGCG CAAGGCGCTG CTTTCCCGCC ACCTGCCCAA GGCCCGTTTC
GCCGAATTCT ACGGCGCGTC GGAACTCTCC TTCATCACTG TCGCGAAGGG CGAGGAGCCG
GTGCCCGAGG GCTCCGTGGG CCGGGCCTTC GACGGCGTGC GCCTCGCCAT CCGCGACAAG
GCGGGCCGGC GCCTGCCCAT GGGGCGCATC GGCCTCGTGT TCGTGGAGAG CCCCTTCCTG
TTCCAGGACT ATGCCACCGG CGACAGCGCC GACCTGCTGC GCCATGGCCC GGAAATCAGC
GTCGGCGACA TGGGCCGGCT GGACGCCGCC GGCTTCCTCA CCCTGGCGGG GCGGGCGAAG
CGCATGATCG TCACCTCCGG CAAGAACCTC TATCCCGAAG AGGTGGAGCG GCAGCTGGAG
CTGCACCCCG CCATCGCCAC CGCCGCCGTG ATGGGCGTGC CCGATGGCAA GCGCGGCGAG
CGGCTGGTGG CCTTCATCCA ACCGGAGGAC GGGGCGCAGA TGACGCGGGC GGATCTGGTG
GCGTGGCTGC GGCCGCGCCT CGCCCTGTTC AAGGTGCCGC GGCTTTATGC GCGGGTCGCC
CGCTGGCCGC TGACGGCCTC CGGCAAGACC GATTTTGCCG CCGTCGCCCG CCTGTGGCCG
CACGATTGCG AGCTGATCCC ATGA
 
Protein sequence
MSITRHLARH GAERPDAPAL TCEGESLTYG SLAALVQRIA ARFRDAPDGG IALDLPNGAA 
LAALFLAAAH AGREGQVLDP AWPVGQRADI LARIRPGLLV SCGADADVRL SPAQGLAGLA
EAMGAGAAEV TGAPDPDLPF YVGFTSGSTG LPKGYRRAHR SWTESFDADT REFGIGPDDV
VLAPGALTHS LFLYALARGL DAGAHVILSK SFRPRAVAEL ARRHTASVLY GVPTQLALLL
DHLAAEGARL DGIRLVLCSG AKWPAGRKAL LSRHLPKARF AEFYGASELS FITVAKGEEP
VPEGSVGRAF DGVRLAIRDK AGRRLPMGRI GLVFVESPFL FQDYATGDSA DLLRHGPEIS
VGDMGRLDAA GFLTLAGRAK RMIVTSGKNL YPEEVERQLE LHPAIATAAV MGVPDGKRGE
RLVAFIQPED GAQMTRADLV AWLRPRLALF KVPRLYARVA RWPLTASGKT DFAAVARLWP
HDCELIP