| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1965 |
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| Symbol | sdhA |
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| ID | 5424463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2222048 |
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| End bp | 2223883 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640881217 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001416866 |
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| Protein GI | 154245908 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.181761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA CCGCAACCAA CGGGGCCGCC GCGCCCGGCA TCAACGGCGC TGCCTACCCC
ATCGAGGACC ACACCTACGA CGTGCTCGTG GTGGGCGCTG GCGGCGCCGG CCTGCGCGCC
GTGGTCGGCT GCTCGGAAGC CGGCCTGCGC ACCGCCTGCA TCACCAAGGT GTTCCCCACC
CGCTCCCACA CGGTGGCGGC CCAGGGCGGC GTCGCCGCCT CCCTCGCCAA CATGGGCGAG
GACAAGTGGG AATGGCACAT GTACGACACC GTGAAGGGGT CGGACTGGCT GGGTGATCAG
GACGCCATCG AATACATGGT GCGCAACGCG CCCGCAGCGG TCTACGAGCT GGAGCACTGG
GGCGTGCCCT TCTCCCGCAC CGAGGACGGC AAGATCTACC AGCGCCCGTT CGGCGGCATG
ACCACCCATT ACGGCAAGGG CACCGCCCAG CGCACCTGCG CCGCGGCGGA CCGCACCGGT
CACGCCATGC TGCACACGCT CTATGGGGCG GCGCTGAAGC ACCACGCCGA ATTCTTCGTC
GAATACTTCG CCATCGACCT CATCATGGAT GAGGACGGCC GCTGCCGGGG CGTCATCGCC
ATCAAGCTCG ACGACGGCAC CATCCATCGC TTCCGCGCCC ATCTCGTGGT GCTCGCCACC
GGCGGCTACG GCCGCGCCTA TTTCTCCGCC ACCTCGGCCC ATACCTGCAC CGGCGACGGC
GGCGGCATGG TGCTGCGCGC CGGCCTGCCG CTGCAGGACA TGGAATTCGT GCAGTTCCAT
CCCACCGGCA TCTACGGCTC GGGCTGCCTC ATCACCGAGG GCGCCCGCGG CGAAGGCGGC
TACCTCACCA ATTCCGCGGG CGAGCGCTTC ATGGAGCGCT ATGCCCCGTC GGCCAAGGAC
CTTGCCTCGC GCGACGTGGT CTCCCGCTCC ATGACCATGG AGATCCGCGA GGGCCGCGGC
GTCGGCAAGA ACAAGGACCA CATCTTCCTG CACCTCGACC ATCTCGACCC CGCCATCCTC
CACGAGCGCC TGCCCGGCAT CTCGGAGAGC GCGAAGATCT TCGCCGGCGT GGACCTGACC
CGCGAGCCGA TCCCGGTGAT CCCGACCGTG CACTACAACA TGGGCGGCAT CCCCACGAAC
TATTACGGCG AGGTGCTGGA CAAGCGCTCC GGCGATCCCG ACACGGTGGT GCCCGGCCTC
ATGGCCATCG GCGAAGCCGC CTGCGTCTCG GTGCACGGCG CCAACCGCCT CGGCTCCAAC
TCGCTCATCG ACCTCGTGGT GTTCGGCCGC GCGGCCGGCC TGCGCGCCGC CGAGCTGGTG
AAGCCCGGCG AGAAGCACCG CGAGCTGCCG GCCGGCAGCG CAGACCTCGC GCTCTCCCGT
CTGGATGCGG CCCGTTATGC TTCCGGTGGC ACCCCCACCG CCGAGCTGCG GCTCGCCATG
CAGAAGGTGA TGCAGAGCAA CTGCGCCGTC TTCCGCACCG GCGAGGTGCT TGAGGAAGGC
TGCAAGCTGA TCCACGACGT CTACAAGGGC GCAAGCGACA TCGGCGTCAC CGACCGGTCG
CTGGTGTGGA ACTCGGACCT CATCGAGACG CTGGAGTTCG AGAACCTCAT CGCCCAGGCC
ATCGTCACCA TGGAGGGCGC GAGCGCCCGC AAGGAAAGCC GTGGCGGCCA CGCCCGCGAG
GACTTCCCGG ATCGCGACGA CGTGAACTGG ATGAAGCACA CCCTCGCCTA CTTCGACACC
GCAACCGGCA ACGTGCGTCT CGATGACCGG CCGGTGCACA CCTACACGCT GTCCAACGAC
ATCCAGTACA TCGAGCCCAA GAAGCGCGTG TACTGA
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| Protein sequence | MADTATNGAA APGINGAAYP IEDHTYDVLV VGAGGAGLRA VVGCSEAGLR TACITKVFPT
RSHTVAAQGG VAASLANMGE DKWEWHMYDT VKGSDWLGDQ DAIEYMVRNA PAAVYELEHW
GVPFSRTEDG KIYQRPFGGM TTHYGKGTAQ RTCAAADRTG HAMLHTLYGA ALKHHAEFFV
EYFAIDLIMD EDGRCRGVIA IKLDDGTIHR FRAHLVVLAT GGYGRAYFSA TSAHTCTGDG
GGMVLRAGLP LQDMEFVQFH PTGIYGSGCL ITEGARGEGG YLTNSAGERF MERYAPSAKD
LASRDVVSRS MTMEIREGRG VGKNKDHIFL HLDHLDPAIL HERLPGISES AKIFAGVDLT
REPIPVIPTV HYNMGGIPTN YYGEVLDKRS GDPDTVVPGL MAIGEAACVS VHGANRLGSN
SLIDLVVFGR AAGLRAAELV KPGEKHRELP AGSADLALSR LDAARYASGG TPTAELRLAM
QKVMQSNCAV FRTGEVLEEG CKLIHDVYKG ASDIGVTDRS LVWNSDLIET LEFENLIAQA
IVTMEGASAR KESRGGHARE DFPDRDDVNW MKHTLAYFDT ATGNVRLDDR PVHTYTLSND
IQYIEPKKRV Y
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