| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1960 |
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| Symbol | |
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| ID | 5424696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2216308 |
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| End bp | 2218422 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640881212 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001416861 |
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| Protein GI | 154245903 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.38724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0240041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGC CGCAGGCGGC CCAGACCGGC GCCACGGAAC CGGCCACGGG ATCCACGCCT
TCCGCTTTCA CCCTGCGCGA TTTCCTGATC GCCGCTTTCT ACCACATCCG CATCGTGCTG
CTGGCGGGGT TGATCCCGCT CGTGGTGGCG GTGGCGGTGG CGGCGACCAG CCGCACCGAA
TACACCGCCT CCAGCCTGCT CATGGTGATC GTGAGCCGCG AGGTGTCCAA CGCCCAGAAC
GTGACCGACA GCGGCCCCGC CGTGCTCAGC ATCGAGGGCC TGAAGCAGGT CGAATCGGAA
GTGCAGATCA TCGAGAGCGC CGACGTTGCC CGCGCCACGG TGGTCGAGAT CGGCGTGGAC
CGGCTGTTCC CGCCGGGGCG GCTTGCCGCC ATCACCCGCC TGTTCAGCTC CGACAAGGAT
GTGATGGACA AGGCGGTGGA GCGCTTCCAG GCCAGCCTGC GGGCCTCCGT GCAGTCCGGC
TCCAACGTGA TTCGGGTCAG CTTCACCAAT CCCGACCGCG ACGTGGCCAT CGCCGCCGCC
GACGCGCTGG TGAAGAATTA TCTCGCCGCC CGCCGCCGCC TGTTCGAGAA CCCCACCGCC
AAGATCCTGA TGCTGGAGGT GAACCGCTTC CAGAGCGACC TCACGGCGGT GGACCGGGAG
ATCGAGCAGC TCAAGGTCAA GGCCGGCATC ATCGATTTCG CCCAGGATGC CATTCTCGCC
TCTAACCAGG TGGACAGCAT CCTCCAGCGC CGCCGGCAGG TGGCCGAGCG CGAGGTGGCC
GTCGCCGCCC AGGTCACGGA GGCGGAAAAG CAGTTCGCAG CCCTGCCTGA TTCGGTCTTC
GACTTCGCCG AGAAGACCGA CGCCCTGCCC GGCGACGAGG ACAACAACAC CCTCTCCAAG
CTGCTGCTGG AGCGCGACCG GGTCGCCTCC CAATACGCCC CGGGCAGCCA GCTGCTGCGC
GACCTCGATC GCCAGATCGC CACCATCCGG GCGCGGATCA AGACCCGTTC GGAGCGGCGC
TATTCCACCG ACCGGGCGGT GCGCAACCCG CAGGTCAACT ACATCCAGAA CATGATCCTG
AGCCTCAAGG TGGAGCAGGA TTCCCTCGGC CGGCAGAAGG CCGAGCTGGT GCAGCAGCAG
CGCCTCGCCG AGGAGCGTCT CGCTGCGCTG CGCGCCGCCG AGACGCCGCT CATCGAGCTG
AACCGCAAGC GCGATTCGCT GGGCGAAGGC TTCCGCGAAT ATCAGCGCCG GGCCGTGGCC
GCCGCCATCG AGGAGGCGGC CGCCCAGTCG CGCCAGTCCG CGGTGCGCGT GGTGCAGGAG
GCCGGCTCGG CGGTCACCAA GCGCTCGCTG GCGCTGCCGC TGGTGGCGGC GGGCCTGTTC
GCCGCCATCC TGTTCGGCGG CGCGGCCGGA GCCCTCGCCT CAAGCCTGCG TACCTCCTTC
GTCACCCCCG CCGAGGCGGA ACGCGCGCTC GGCCTGCCGG CGCTCGCGGT GTTCGACGCC
GAGGCGGAGC AGCCCGGCAA TGCCGCGACC GACGAGGCCA TCGGCAGTTG CGCCACCCTG
CTGCTCGACA CCCGCATCGA CGAGGAGCCG CTGCGGGTCC TGCATTTTCT CGCGCCCGAC
GCCGACGACG CCCTGCCCTG GCTCGCCCGG CGGCTGGCGG AGGAGTTCGC CGCGCGGCGC
CAGCTGCGCA CGCTGCTGAT CGACCTCTCC AGCGCCGCGC CCTACCCGCT GGCCGCCGGC
GGCGGCGAGG TGCGCGGCGG CATCGCCGTT ACCGGCACGC CGGTGCCCCT GCTGTGGGCC
GCCGCCGACG CGGAGCGCTC GCCGCTGCTC GACTTCCGCC TGCCCATCGC CGAGGCGGAA
CTGATGATGG CCGAGCTGCG CCGCGGCTTC GACTGCGTCG TCATCTCCTC CGACCTGCCC
GGCGCCTCGC TTGTCACCCA GCGCTTCTGC CAGCTGGTGG ATGCCAATAT CCTCGCGGTG
CAGGCGGAAA AGTCGCGCAC GCCAGCGGTG GCCCGCCTGC GTGACCAGGT GGCGGAGAGC
GGCGGCCTCA CTATCGGCTT CGTCTTCCTC GGCCGGCGCT ATTACTTGCC GAACTGGCTC
TACAGCCGCG CCTGA
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| Protein sequence | MLMPQAAQTG ATEPATGSTP SAFTLRDFLI AAFYHIRIVL LAGLIPLVVA VAVAATSRTE
YTASSLLMVI VSREVSNAQN VTDSGPAVLS IEGLKQVESE VQIIESADVA RATVVEIGVD
RLFPPGRLAA ITRLFSSDKD VMDKAVERFQ ASLRASVQSG SNVIRVSFTN PDRDVAIAAA
DALVKNYLAA RRRLFENPTA KILMLEVNRF QSDLTAVDRE IEQLKVKAGI IDFAQDAILA
SNQVDSILQR RRQVAEREVA VAAQVTEAEK QFAALPDSVF DFAEKTDALP GDEDNNTLSK
LLLERDRVAS QYAPGSQLLR DLDRQIATIR ARIKTRSERR YSTDRAVRNP QVNYIQNMIL
SLKVEQDSLG RQKAELVQQQ RLAEERLAAL RAAETPLIEL NRKRDSLGEG FREYQRRAVA
AAIEEAAAQS RQSAVRVVQE AGSAVTKRSL ALPLVAAGLF AAILFGGAAG ALASSLRTSF
VTPAEAERAL GLPALAVFDA EAEQPGNAAT DEAIGSCATL LLDTRIDEEP LRVLHFLAPD
ADDALPWLAR RLAEEFAARR QLRTLLIDLS SAAPYPLAAG GGEVRGGIAV TGTPVPLLWA
AADAERSPLL DFRLPIAEAE LMMAELRRGF DCVVISSDLP GASLVTQRFC QLVDANILAV
QAEKSRTPAV ARLRDQVAES GGLTIGFVFL GRRYYLPNWL YSRA
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