| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1932 |
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| Symbol | rplT |
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| ID | 5424932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2187928 |
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| End bp | 2188290 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640881185 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001416834 |
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| Protein GI | 154245876 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00425676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0301455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCG TCAAACGTGG CGTTACCTCG CACGCCAAGC ACAAGAAGGT CTTTGAAGCC
GCCAAGGGCT TTTACGGCCG TCGCAAGAAT ACCATCCGCG CTGCCAAGTC GGCCGTCGAA
CGGTCGATGC AGTATGCCTA CCGCGACCGC AAGGTTAAGA AGCGCAACTT CCGTGCGCTC
TGGATCCAGC GCATCAACGC CGGTGTGCGC GCGCTTGATC TCGACCTGAC CTATTCGCGA
TTTATCGATG GTCTCGGCAA GGCCGGGATC GAGGTCGACC GCAAGGTGCT CTCGGATATC
GCCATCCACG AGCCCGACGC GTTCAAGGCC CTAGTGGAGA AGGCCAAGGC CGCGCTGGCC
TGA
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| Protein sequence | MARVKRGVTS HAKHKKVFEA AKGFYGRRKN TIRAAKSAVE RSMQYAYRDR KVKKRNFRAL
WIQRINAGVR ALDLDLTYSR FIDGLGKAGI EVDRKVLSDI AIHEPDAFKA LVEKAKAALA
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