Gene Xaut_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1597 
Symbol 
ID5423853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1807022 
End bp1810156 
Gene Length3135 bp 
Protein Length1044 aa 
Translation table11 
GC content66% 
IMG OID640880844 
Productacriflavin resistance protein 
Protein accessionYP_001416501 
Protein GI154245543 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT CCGCTCCTTT CATCCATCGC CCCATCGCCA CCACGTTGCT GATGGCGGCC 
CTCGTCCTCG TGGGCGCTGT GGCCTATGCC ATGCTGCCGG TGGCGCCGCT GCCGCAGGTG
GACTTCCCGA CCATCCAGGT GTCGGCGAGC CTGCCGGGCG CGAGCCCAGA GACCATGGCG
TCGTCGGTCT CCACGCCGCT GGAGCGGCAG TTCAGCCAGA TTTCCGGCGT CACCCAGATG
ACGTCCACAA GCGCGCTCGG CGTCACCTCC ATCACCGTCC AGTTCGACCT CAACCGCAAC
ATTGACGCCG CGGCGCAGGA CGTGCAGTCG GCCATCAACG CGGCCGCCGG CCAATTGCCC
AAGAACCTCC CCAGCCCGCC TACGTTCCGA AAGGTCAATC CGGCCGATGC GCCGATCCTG
ATCCTGTCGG TGCAGTCGGA CCTCTACCCG CTGACCAAGC TCGACGATGC CGCCGACACC
ATTCTGGCGC AGCAGATCAG CCAGATCGCC GGCATCGCGC AGGTTGCGAT CACCGGCGAG
CAGAAGCCGG CGGTGCGGGT GCAGGTGGAC CCCTCCAAGA TCGCGGCCCT CGGCATGAGC
CTTGAGGATG TGCGGGCCGT GCTCGCCGCC GCCACCGTGG ACCAGCCCAA GGGCAGTTTC
GACGGCGCGG CCCAGGGCTT CACCATCTAT GCCGACGACC AACTCCTCGC TGCCACGCCC
TGGAACGAGG TGGTTGTAGC CTATCGCAAC GGCGCGCCGG TGCGCATCCG CGACATCGGC
CGGGCCGTGG ACGGCCCCGA GAATGCGCGC CTCGCCTCGT GGCAGAACGG CAAGCGCGGC
ATCCAGCTCA TCGTGTTCAA GCAGCCCGGC GCCAATGTGA TCGAGACCGT GGACCGGGTG
CGCGCCATGA TCCCGCGCCT CGAGGCGGCG CTGCCGCCGG GCATCAATGT GGAGATCATC
GCCGACCGGA CCCAGACCAT CCGCGCCTCG GTGGAGGACG TGCAGTTCAC CATGCTGCTT
ACCATCGCGC TGGTGGTGGG GGTGATCTTC GCCTTCCTGC GCAACCTGTG GGCGACGGTG
ATCCCCTCCG TCACGGTGCC TATGGCGCTG ATCGGCACCT TCGCGGTCAT GTACGTGCTG
GGCTACAGCA TCGACAACCT GTCCCTCATG GGCCTGACCA TCGCGGTGGG GTTCGTGGTG
GACGATGCCA TCGTCATGCT GGAGAACGTC TACCGCCATA TCGAGGAGGG CCTGCCGCCC
TTTCAGGCGG CGCTGAAGGG GGCGGGGGAG ATCGGCTTCA CCATCATCTC CATCAGCCTG
TCGCTGGTGG CGGTGTTCAT CCCGGTGCTG ATGATGGGCG GCATCGTCGG CCGGCTGCTG
CGGGAATTCG CGGTCACGGT GACCATCACC ATCCTGGTGT CGGTGGTGGT GTCGCTCACC
CTCACCCCCA TGATGTGCGC GCTGTTCCTG AAGAATGACC ATGGCGCGAA GCACGGCCGC
GCCTACATGG CGGCGGAAGC CTTCTTCGAC GGCATGCTCA AGGTCTACGA CACCGGCCTG
AAATGGGTGC TGAAGCACCA GTTCGCGACC CTCATGAGCC TGTTCGTCAC CATGGCCGCC
ACCGGCTATC TCTATGTGGT GATCCCCAAG GGCTTCTTCC CGCAGCAGGA CACCGGCTTC
ATCCAGGGCT TCTCCGAAGC GGGGCAGGAC ATTTCCTTTG CCGCCATGAC GCAGAAGCAG
ATGGCGCTGA TGGCGGTGGT GGCGCGCGAT CCGGCGGTGG AGGCCGTCTC CGGCGCGGCC
GGCGCCACCG GCGGCTCGCA GACCGTGAAC ACCGGCCGCG TCTGGATCAC ACTGAAGCCG
CGCAATGAGC GGGATGCCAG CGCCGACCAG GTCATCGCCC GGCTGCGGCC GCAGCTTGCC
AAGGTGGAGG GCATCGCCCT GTTCCTCCAG GCGTCACAGG ACATCAACGT GGGCGGCCGG
CCCTCGCGCA CGCAGTATCA ATACACATTG CAGGACGCCA ATCTCGACGA ACTGAACGCC
TGGGGCCCGC GCATGCTTGC CAAGCTCCGC GCCCTGCCGC AGCTGCAGGA CGTGGCCACC
GACCAGCAGA CCAATGCGCC CACGGTCTCC CTGACCATCG ACCGCGACAC CGCGGCGCGC
TTCGGCATCC TGCCCCAGGT GATCGACGAC ACGCTCTACG ACGCCTTCGG CCAGCGGCAG
GTGGCGCAGT ATTTCACCCA GCTGTCCCAG TACCACGTGA TCCTGGAGGT GGATCCCACG
CTGCAGGGTG ACCCGAGCGC GCTGGAAAAG CTCTATGTGC GCTCGCCTCG CACGGGCGAG
GAGATCCCGC TCTCGGCCTT CGTGAAGGTG GATACGTCAA AGTCCGCCTA TCTCTCCATC
TCCCACCAGG GCCAGTTCCC GGCGGTGACG CTGAGCTTCA ACCTCAGCCC CGGCACCGCG
CTGGGGCAGG CGGTGGACGC CATCAAGCAG GCAGAGCGCG AGATGGGCAT GCCGGCGACC
CTGATCGGCA CCTTCCAGGG CACGGCGCAG GCGTTCCAGA ATTCCCTGAG CAGCCAGCCC
TACCTGATCC TGGCCGCCAT CATCGCCGTC TACATCATCC TGGGGGTGCT CTACGAGAGC
TACATCCACC CGCTCACCAT CCTGTCGAGC CTGCCGTCGG CGGGGGTCGG CGCGCTCCTG
ATCCTCTATC TCTTCGGCTA CGACCTGAGC GTGATCGCGC TCATCGGCAT TCTGCTTCTC
ATCGGCATCG TCAAGAAGAA CGCCATCATG ATGATCGACT TCGCCCTCGC GCGGGAGCGG
GAGGAGGGGA TGGCGCCGGA GGAGTCCATC TACCAGGCCT GCCTCATCCG CTTCCGGCCC
ATCATGATGA CCACCATGGC GGCACTGCTC GGCGGGCTGC CGCTGATGCT GGGCACCGGC
ACCGGATCGG AGCTGCGCCG TCCGCTGGGC TTTGCCATCG TCGGCGGCCT GCTGGTGAGC
CAGGTGCTGA CCCTCTACAC CACGCCGGTG GTCTATCTCT ACATGAACCG CCTGCAGCGC
TTTTTCGCCG ATCGCCGACG CCCGGCGCCA CCATCGCCGG CGGTGATGCC GCCGCTGGAT
GTGGCCGCTG AGTGA
 
Protein sequence
MNISAPFIHR PIATTLLMAA LVLVGAVAYA MLPVAPLPQV DFPTIQVSAS LPGASPETMA 
SSVSTPLERQ FSQISGVTQM TSTSALGVTS ITVQFDLNRN IDAAAQDVQS AINAAAGQLP
KNLPSPPTFR KVNPADAPIL ILSVQSDLYP LTKLDDAADT ILAQQISQIA GIAQVAITGE
QKPAVRVQVD PSKIAALGMS LEDVRAVLAA ATVDQPKGSF DGAAQGFTIY ADDQLLAATP
WNEVVVAYRN GAPVRIRDIG RAVDGPENAR LASWQNGKRG IQLIVFKQPG ANVIETVDRV
RAMIPRLEAA LPPGINVEII ADRTQTIRAS VEDVQFTMLL TIALVVGVIF AFLRNLWATV
IPSVTVPMAL IGTFAVMYVL GYSIDNLSLM GLTIAVGFVV DDAIVMLENV YRHIEEGLPP
FQAALKGAGE IGFTIISISL SLVAVFIPVL MMGGIVGRLL REFAVTVTIT ILVSVVVSLT
LTPMMCALFL KNDHGAKHGR AYMAAEAFFD GMLKVYDTGL KWVLKHQFAT LMSLFVTMAA
TGYLYVVIPK GFFPQQDTGF IQGFSEAGQD ISFAAMTQKQ MALMAVVARD PAVEAVSGAA
GATGGSQTVN TGRVWITLKP RNERDASADQ VIARLRPQLA KVEGIALFLQ ASQDINVGGR
PSRTQYQYTL QDANLDELNA WGPRMLAKLR ALPQLQDVAT DQQTNAPTVS LTIDRDTAAR
FGILPQVIDD TLYDAFGQRQ VAQYFTQLSQ YHVILEVDPT LQGDPSALEK LYVRSPRTGE
EIPLSAFVKV DTSKSAYLSI SHQGQFPAVT LSFNLSPGTA LGQAVDAIKQ AEREMGMPAT
LIGTFQGTAQ AFQNSLSSQP YLILAAIIAV YIILGVLYES YIHPLTILSS LPSAGVGALL
ILYLFGYDLS VIALIGILLL IGIVKKNAIM MIDFALARER EEGMAPEESI YQACLIRFRP
IMMTTMAALL GGLPLMLGTG TGSELRRPLG FAIVGGLLVS QVLTLYTTPV VYLYMNRLQR
FFADRRRPAP PSPAVMPPLD VAAE