| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1545 |
|---|
| Symbol | |
|---|
| ID | 5420962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1754548 |
|---|
| End bp | 1756746 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640880793 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_001416450 |
|---|
| Protein GI | 154245492 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.567441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTATG CGCCATCTCC TGCCAAGTAT TGCCGAGAGA CTGCCGAACC CTGCACTGTC
GCGATCATAG GAGGTGGACC GGGGGGGCTA TTCAGCGCCC GGCACCTCAC CGACAAGCTC
GGTGACGCAT GCAGAATCAA GATCTTTGAA GCGAGCGAGC GCCTTGGTGG CAAGATCGTC
ACCGGCGAGT TCGCCGGCGT CGGGCCCTAC GAGGCCGGCG TGGCGGAGAT CTACGATTAT
TCCTCCCTCG GCCCCGATCC CCTCCGCTAT TTGATCGAGA CCGAGCTCGG CCTTGAAATC
CGGCACATCG CCGGCGGCTC CTGCATCCTC GACGGACAGA TCATCCACGA TGTGGAGCAT
CTGGGAGCGG TCTTCGGATC GGAAGCGCGG GACCAGGTGG TCCACTTCAA GCAGAAATGC
GCGGAATTGC TCAGCGTGGA TGACTTCTAC GCCAGCACCC GCAACGTGGA CAACCACCAC
TCCTGGGCCC GCAAGTCGGG CGAGGAAACA CTCTATAACG AGATCACCAA TGATGCCGCC
CGGCGTTACG TGCGCATCAT GGCGCACAGC GACGTCGCCG CCCCGCCGCA TCTGACCAAC
GGCCTGACAT TCCTCAAGAA CGTCTTGATG GATGTACCCG GATACATGGA TGTCTTCTCC
GTGGTCGGCG GCAACGAGCA GATCGTGGAC GGCTTGTGCG AGCTGATCGA CGCGGAGGTC
CATCTCGGCG CCACGGTGAA GTCGGTGAAG CCGCTGTTCG ACGGACGCTT CCAGCTGGAC
ATCTGCACCC ACGGCGCCAT CGAGCATGAG GTGGTGGACT ATGTGGTGGT CTGCCTGCCC
CTGACCGCCC TGTCCATCAT CGACTGGCGC TCGCCGCACC TCAAGGCGGC CATGGACCAG
CACATCAACT ACTTCGACCG GCCCGGTCAC TACCTGCGTG CCACGCTGCT GTTCGAGCGC
CCGTTCTGGC GCGAACACAT CTCCGGGGCC TGGTGGATGC TCGATGCGTT CGACGGATGC
TGCGCCTACG ACGAGGGCGC GCGCACCCCC ATCGGACCGT GGGGCGCTCT GGGCTTCCTC
ATCGCCGGCA ATGCCGCCCT GGGCCTTGCC AACATGAGCG ACGAGGACAT CGAGCGCCTG
TGCCTCGACG CCCTGCCGCC GGCCTTCGGG GACGCGCGCC GACTTCTGGT CGATCGCAGG
ATCCATCGCT GGATGGCATC GGTGAATGCG ATCCCCGGCG GCTATCCGGT CCGCAGCGCC
TATGTGAACC ACCGCCCGGC CGCCAAGCAG TATCCCGGCC TTCTGGTGGT GGGCGACTAC
ATGTTCGACG CGACGCTCAA CGGCGTCCTG GATTCGGCCG ATGCCGCCTC CGATATCATC
GTCAGCGAGG TCATGGCGCG GCGGCGCGCC CAGTTCGCGC CCCCCGCTCC ACGCCGCGAC
CGGCCCGCCG AAGTCGCGGA ATCCGCCCGG AGCGATGCGA GCCGCAACGG GGCACTCAAC
GGCAGCTACC TGGCCGAGAT CATGGAAGCC GCATGGGGCG TGCAGCCCGG CGCGCGAATC
CTGCATTTCG GCTCGGGCTC CGGCAAGCTG TTGTCGGACC TGCGGGCGCT CGGATTCGAT
GCCATCGGCG TCGAGCCCTG CCGCGCCGCC TGGGAAGGCA CCCCGCACCG GCTGCGCGGA
CACAACCTGC GCATCTGCCC GCAGCGCCTG CCATTTCCCG ACGGCTCGTT CGACGTGGTC
ATCGAGACCG GCCTGTGCCG CCTCGAGCGC GACCAGCTCA CAGAGGTCAT CACCGAGATC
CGGCGCGTCG CCTCCCGCGG CTTCATCCTG GGCTCGGTCA CCAGCGACCT GCCCATCGAG
GTCATCGAAC GCCACGAACT GCTCACCGGC ATCAAGACGC TGACGTCGCG CTGGGGCTGG
TCGGACCTGC TGTTGTCCCT GGGCTTCCGC TTCGCCCTCG CCGATCCGGC CAAGCTGGAC
AGCGCATGGC GGCTCTCGGT GGGCGCCGGC GTCGCGCCCA GCGAATGGTT CGAGGATGCC
GAGTGCCTGC GCTACTGCAC CTACGACGCC AGGCAGGAAA CCGCTTCGAG GGATATCGCC
ACGGCCGCCG AGGTCGCGCG GATCATCGCC GAGCACCTTT ATGACGACGA TCGCGTCCCC
GTCCGGCCCA TGGCCGCCCG GGCCGCCCTG ATGCCTTGA
|
|---|
| Protein sequence | MRYAPSPAKY CRETAEPCTV AIIGGGPGGL FSARHLTDKL GDACRIKIFE ASERLGGKIV
TGEFAGVGPY EAGVAEIYDY SSLGPDPLRY LIETELGLEI RHIAGGSCIL DGQIIHDVEH
LGAVFGSEAR DQVVHFKQKC AELLSVDDFY ASTRNVDNHH SWARKSGEET LYNEITNDAA
RRYVRIMAHS DVAAPPHLTN GLTFLKNVLM DVPGYMDVFS VVGGNEQIVD GLCELIDAEV
HLGATVKSVK PLFDGRFQLD ICTHGAIEHE VVDYVVVCLP LTALSIIDWR SPHLKAAMDQ
HINYFDRPGH YLRATLLFER PFWREHISGA WWMLDAFDGC CAYDEGARTP IGPWGALGFL
IAGNAALGLA NMSDEDIERL CLDALPPAFG DARRLLVDRR IHRWMASVNA IPGGYPVRSA
YVNHRPAAKQ YPGLLVVGDY MFDATLNGVL DSADAASDII VSEVMARRRA QFAPPAPRRD
RPAEVAESAR SDASRNGALN GSYLAEIMEA AWGVQPGARI LHFGSGSGKL LSDLRALGFD
AIGVEPCRAA WEGTPHRLRG HNLRICPQRL PFPDGSFDVV IETGLCRLER DQLTEVITEI
RRVASRGFIL GSVTSDLPIE VIERHELLTG IKTLTSRWGW SDLLLSLGFR FALADPAKLD
SAWRLSVGAG VAPSEWFEDA ECLRYCTYDA RQETASRDIA TAAEVARIIA EHLYDDDRVP
VRPMAARAAL MP
|
|---|
| |