Gene Xaut_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1223 
Symbol 
ID5422755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1408640 
End bp1409290 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID640880471 
Producthypothetical protein 
Protein accessionYP_001416129 
Protein GI154245171 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0296211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT TCTTCGCAAC CCCGGTGCGG GATGCCTCCA CCGCCGTCGC CGATTACTTC 
GTGCCGGCCA ACGCCCCCTT CTCCTGTCTG GTGAAGAAGG GCGAGAGCGT GCGCATCGTG
GACCTGGAAG GCCAGCAGGC GGTGGATACG CTGTTCTACC GCGCCGACGA CTTCTCCGAG
CGCTATTCCT CTCAGGATAC GCTGCGGGTG CAGGGCTCGG CCTATGTGTC CACGGGCACG
AAGCTGATTT CGTCCGAAGG CAACCTCATG CTGACCGTGA CCGCCGACAC CTGCGGCCGG
CACGACACCT CGGCAGGCGC CTGCTCGTGC GAGGCCAATA CGGTGCGCTT CGGCCATCAG
GTGAAGTATC TGCACGCCTG CCGCGAGAAT TTCGTCATCG AGGTGATGAA GCACGGCATG
TCGAAGCGGG ACGTGGTGCC CAACATCAAC TTCTTCATGA ACGTGCCGGT GGAGCCCTCG
GGCGAGCTGG CCATCGTGGA CGGCATCTCC GGCCCCGGCG ACTATGTGGA GCTGAAGGCC
GAGATGGACG TGCTGCTCGT CATCTCCAAC TGCCCGCAGA TCAACAATCC CTGCAACGGC
TTCAACCCGA CGCCGATTCA GGTCCTCGTC TTCGCCGGCG AGGAGGGCTG A
 
Protein sequence
MSKFFATPVR DASTAVADYF VPANAPFSCL VKKGESVRIV DLEGQQAVDT LFYRADDFSE 
RYSSQDTLRV QGSAYVSTGT KLISSEGNLM LTVTADTCGR HDTSAGACSC EANTVRFGHQ
VKYLHACREN FVIEVMKHGM SKRDVVPNIN FFMNVPVEPS GELAIVDGIS GPGDYVELKA
EMDVLLVISN CPQINNPCNG FNPTPIQVLV FAGEEG