| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0927 |
|---|
| Symbol | |
|---|
| ID | 5423581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1045374 |
|---|
| End bp | 1046219 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640880174 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
|---|
| Protein accession | YP_001415835 |
|---|
| Protein GI | 154244877 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTG CTTCCTTCAC CCATGCCGGC CGTGCCGGTT ACGGCCTCGT GACGGACGGA
GGGATCATCG ATCTCACCCG CCGCTTCCCC GAAGCGCCGA CCTTGCGGAC CTTCATCGCC
GGCGGGCTGG ATCGTGCCGC CGCCGTCGCC GGCGCGCCGG CGGATTTCGC CTTGTCCGAG
GTGACGCTCG CTCCGGTCAT TCCAGACCCG GACAAGATCG TCTGCGTGGG CCTCAACTAC
CATGACCATG TGAACGAGAC GGGACGCACG GTCACCCCCA ATCCCATGCT GTTCGCGCGG
TACGCTGGAA GCCAGGTCGG CGCTGGCACG GCCCTGGTGA AGCCGCTGGA ATCCGACGAG
TTCGACTATG AAGGCGAACT TGCCGTCATC ATCGGCAAGG CCGGCCGGCG CATCTCCGAG
GCCGACGCCC TCTCCCATGT GGCGGGCTAT GCCTGCTATA ATGATGCCAG TGTGCGCGAC
TGGCAGCGCC ACACCTCGCA GTTCATGCCC GGCAAGACCT TTGCCGCCAC CGGCGCCTTC
GGCCCCTGGA TGGTGAGCGC CGACGAGATC CCCGATCCCA CGCGCCTCAC CCTCGCCACC
CGCCTCAACG GCGCGCAGGT GCAGCACACG AGCGTGGATC TGATGATCAC CCCCATCCCC
ACGTTGATCG CCTACACCTC CACCATCCTG CCCCTGCTGC CTGGCGATGT GATCGTCTCC
GGCACGCCTG GAGGCGTGGG GGCGCGTCGC ACGCCCAAGC TGTTCATGAA GGACGGCGAT
GTGGTGGAAG TCGAGGTCAG CGGCATCGGC GTGTTGCGCA ACCCCATCGT CGCCGAGCTT
GCCTGA
|
|---|
| Protein sequence | MKFASFTHAG RAGYGLVTDG GIIDLTRRFP EAPTLRTFIA GGLDRAAAVA GAPADFALSE
VTLAPVIPDP DKIVCVGLNY HDHVNETGRT VTPNPMLFAR YAGSQVGAGT ALVKPLESDE
FDYEGELAVI IGKAGRRISE ADALSHVAGY ACYNDASVRD WQRHTSQFMP GKTFAATGAF
GPWMVSADEI PDPTRLTLAT RLNGAQVQHT SVDLMITPIP TLIAYTSTIL PLLPGDVIVS
GTPGGVGARR TPKLFMKDGD VVEVEVSGIG VLRNPIVAEL A
|
|---|
| |