| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0599 |
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| Symbol | |
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| ID | 5424815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 673279 |
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| End bp | 674013 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879845 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001415512 |
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| Protein GI | 154244554 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.633648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC GTTCATTGCG GGCGGTGCTC GTCGCCGCGC CGCTTCTTTT CTGCCCGTTC
GCGCCGGCCG TGGCGCAGTA CGTGGTCTAC GACCCCTCCA ACTATGCCCA GAACGTCCTT
CAAGCTGCTC GGGCGCTACA GCAGGTCACC AACCAGATCA CCTCGCTTCA GAACGAAGCG
CAGATGCTGA TCAATCAGAC CCGCAATCTT GCGAACCTGC CTTATTCCTC TATCAGCGCA
TTCCAGCAGG CGGCCCAGCG CACCCAGCAA TTGCTCGGTC AGGCCCAGAA GATCGCCTAT
GACGTCACCG CCATCGACCG GGCGTTTCAG GGCCAGTATG GCTCGGTCTC CCTGAGCAGT
TCGGATGCCG CCCTTGTCAC CCAGGCGAAG AGCCGCTGGG AGACCACGGT CGCCGGCCTC
CAGGATGCGC TGCGGGTGCA GGCGGGCGTC GTCGGCAATC TCGACACCGG CCGCTCGCAG
GCCTCGACAC TGGTCGGCCA GAGCCAGGCG GCGAGCGGCG CGCTGCAGGC CATGCAGGCG
GGCAACCAGC TTCAGGCGCT CCAGGCCCAG CAGCTCTCCG ACCTCACCGC CGTGATCACG
GCGAACGGCC GCGCACAGGC CCTGTCCGAA GCTGAGCGGG CGACGGCGGT GTCGGAAGGG
CAGGAGCGCT ACCGGCGCTT CTCCACCCGG TCGAGCTACC AGCCTGCCGC CGTCACCATG
TTCCACGGCA AGTGA
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| Protein sequence | MIRRSLRAVL VAAPLLFCPF APAVAQYVVY DPSNYAQNVL QAARALQQVT NQITSLQNEA
QMLINQTRNL ANLPYSSISA FQQAAQRTQQ LLGQAQKIAY DVTAIDRAFQ GQYGSVSLSS
SDAALVTQAK SRWETTVAGL QDALRVQAGV VGNLDTGRSQ ASTLVGQSQA ASGALQAMQA
GNQLQALQAQ QLSDLTAVIT ANGRAQALSE AERATAVSEG QERYRRFSTR SSYQPAAVTM
FHGK
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