Gene Xaut_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0498 
Symbol 
ID5425255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp552477 
End bp553136 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID640879745 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001415413 
Protein GI154244455 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAG ACGGATTACG GACGTGCGGT ATTCAACCCG CGGATAAGAG CTTGATCAAC 
CGTCGTCTCA AGGCCCATCC CGTCCCCGTG CTGCCCATCA AAGTGATGAC CAAACCCGTG
CTGCAGGCTC GGGGCGAAGC CGTTCATCTG TGCCTCTTGA CCACAGTCAT AAGAGTGCCG
CCCTCCATCC TGTTCATCCC GCTCGCCATC ATGGTGTTCG GGCTCGGCAT CTACGACACC
AAGCTCGCCC TCATCCTCAC CTACCCCACC TTCCTGGTGC CGTTCTCCAC CTGGCTGCTG
ATGGGCTATT TCCGCTCCAT CCCGTTCGAG CTGGAGGAAT GCGCGCTGGT GGACGGCGCC
TCGCGCTGGC AGATCCTCAT CAAGGTGCTG CTGCCGCTGT CGGTGCCGGG GCTGATCTCG
GCGGGCATCT TCTCGTTCAC CCTGTCGTGG AACGAGTTCA TCTACGCGCT CACCTTCATC
CAGTCGTCGG AGAACAAGAC CGTGCCGGTG GGCGTGCTCA CCGAGCTGGT GCGCTCGGAC
GTGTATGAGT GGGGCTCGCT GATGGCCGGC GCGCTGCTGG GCTCGCTGCC GGTGGTGATC
CTCTACTCCT TCTTCGTGGA TTACTACGTG TCGTCCATGA CCGGAGCGGT GAAGGAATAG
 
Protein sequence
MAQDGLRTCG IQPADKSLIN RRLKAHPVPV LPIKVMTKPV LQARGEAVHL CLLTTVIRVP 
PSILFIPLAI MVFGLGIYDT KLALILTYPT FLVPFSTWLL MGYFRSIPFE LEECALVDGA
SRWQILIKVL LPLSVPGLIS AGIFSFTLSW NEFIYALTFI QSSENKTVPV GVLTELVRSD
VYEWGSLMAG ALLGSLPVVI LYSFFVDYYV SSMTGAVKE