| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0410 |
|---|
| Symbol | |
|---|
| ID | 5421111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 440610 |
|---|
| End bp | 441293 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640879657 |
|---|
| Product | transcription activator effector binding |
|---|
| Protein accession | YP_001415325 |
|---|
| Protein GI | 154244367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.122194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.857811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAT TGCGTTGGGT CAGCCTCGAC AGGATGAGGA GGGCCGCGGC AGGTGCCCTC
CTGAGCGCCG TTTTGAGCGC CCTCCCGGCG CTGGCTCCCC TGCCCGCCGC GGCGCAGAGC
CCGGCCCCCG CCGCCCAGCC CGGCGCGGGC GGGGCATTGA CGCCGCCGCC GGTGGTGGAC
CCCAAGAAGG TGGAGACCAC ACCCGTCGCA CCCGCCGGGC GCAGCTTCGC GCCGCAGGAG
ATCACCCTTT CCCCGGTGCC GGTGCTGACG CTCACCGGCT CGGCCACCTG GGAAGAGGCA
TTCGAGAAGC TGGTGACCAG CGTGAAGCAG GCGGACGCCG AGCTGAAGCG CCTCGGGCTC
ACCCGCGCGG GCGACACTTT CATCGTTTAC ACCTCGAGCG ACGACCTGAG CTTCGAATAT
GAGATCCAGG TGCCGTTCTC CGGCACCACC ACCCAGAAGC CCGGCGACGG CATGAAGCTC
GGCGGCTCCC ACGCGGGCAA GGTGTTGAAA TTCACCCATA CCGGCTCCTT CGCCGACATG
GACAATACCT ACGAGCAAAT CGCCAATTAT CTCGACGAGA AGAACGTCGA GCAGACCGAC
ATGTATATCG AGCAGTACCG GACCGACATC GTCAGCGGCT CCCCCGAAGC CCTGGAAATC
GATATTCTGG TACCAGTTCC GTAA
|
|---|
| Protein sequence | MAGLRWVSLD RMRRAAAGAL LSAVLSALPA LAPLPAAAQS PAPAAQPGAG GALTPPPVVD
PKKVETTPVA PAGRSFAPQE ITLSPVPVLT LTGSATWEEA FEKLVTSVKQ ADAELKRLGL
TRAGDTFIVY TSSDDLSFEY EIQVPFSGTT TQKPGDGMKL GGSHAGKVLK FTHTGSFADM
DNTYEQIANY LDEKNVEQTD MYIEQYRTDI VSGSPEALEI DILVPVP
|
|---|
| |