| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0325 |
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| Symbol | ddl |
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| ID | 5424689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 335585 |
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| End bp | 336505 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879571 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001415240 |
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| Protein GI | 154244282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0370314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.477403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC ACGTGGCGGT GCTCATGGGC GGCTGGTCGT CGGAGCGCGA AGTCTCCCTG
CGCTCCGGCG CCGCCTGCGC CGGTGCGCTG GAGGCGGCAG GCTACCGGGT CACCCGCGTG
GACGTGGGCC GCGACGTGGC CGAGGTGCTG ACGCACCTGA AGCCGGACGT GGCGTTCAAC
GTGCTGCACG GCCAGCCCGG CGAGGACGGC ACCATCCAGG GCATCCTCGA AATCCTGCGC
ATCCCCTATT CCCATTCCGG CGTACTGGCC TCGGCCCTCG CCATGGACAA GGCGCAGGCG
CGAATCATGC TCGCCGCCGC TGGTGTCCCG GTGGCGAAAG GCGGCCTCGT CTCCCGCGCC
GAGGCGGCAA AGGCGCACAT CATGCCCACG CCCTACGTGC TGAAGCCCAA TGCGGGAGGG
TCCAGCGTCG GCGTCTTCAT CGTGCGCGAA GACCAGGCCC ATCCGCCGCA GGAATTGACC
CGTGAGGATT GGCCGCACGG AGAAAATCTT CTCGCCGAAG AATTTATTCC CGGCCTCGAA
CTCACCTGCG CGGTGATGGG CGACAAGGTG CTCGACGTGA TCGAGATCGA GTCCACACAG
AAGTTTTACG ATTACGAAAG CAAATATGCA CCGGGCGGCT CGCAGCACAT TCTTCCGGCC
CGGATTTTAC CCGAAATTTA CCAACGGGTG CAGATGTTAA GCCTCACGGC GCACCGAGCT
CTCGGATGCC GGGGGGTGTC GCGGAGCGAC TTTCGGTTCG ACCCTTCGAG AGGGGATGGC
TCCGGCCTGA TCTGCCTCGA GGTGAACACC CAGCCCGGGA TGACTGAGAC GTCTCTGGTG
CCGGAACTGG CCGCCCACGC GGGCATCTCA TTCGGTGAGC TTGTGACATG GATGGTGGAG
GACGCTTCGC TGGAGCGCTA A
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| Protein sequence | MAKHVAVLMG GWSSEREVSL RSGAACAGAL EAAGYRVTRV DVGRDVAEVL THLKPDVAFN
VLHGQPGEDG TIQGILEILR IPYSHSGVLA SALAMDKAQA RIMLAAAGVP VAKGGLVSRA
EAAKAHIMPT PYVLKPNAGG SSVGVFIVRE DQAHPPQELT REDWPHGENL LAEEFIPGLE
LTCAVMGDKV LDVIEIESTQ KFYDYESKYA PGGSQHILPA RILPEIYQRV QMLSLTAHRA
LGCRGVSRSD FRFDPSRGDG SGLICLEVNT QPGMTETSLV PELAAHAGIS FGELVTWMVE
DASLER
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