| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0322 |
|---|
| Symbol | |
|---|
| ID | 5424735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 332741 |
|---|
| End bp | 333658 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640879568 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001415237 |
|---|
| Protein GI | 154244279 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.472309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.844631 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGC TTGCTGCGAT GCGGGCCTTC GTGCGGGTGG TGGAGACCGG GAATTTCACC
CGCGCCGCCG ACCTCATGGA CATGCCCAAG GCGACACTGA CCAAGCATGT GCAATCGCTG
GAGCAGCATC TGCGCACGCG CCTGTTCAAC CGCACCACGC GGCGTGTCAC GGTCACCCCC
GATGGTGCGG CGTATTACGA GCGGGCGCTG CTGATCCTCA ACGATCTCGA CGAGCTGGAC
GGCTCGTTGT CCACGGCGCA GGCCCTGCCG CAGGGCCGGC TGCGCATCGA CCTGTCGCCG
TCGCTGGCCA CCCGCCTGCT GATCCCGGCG CTGCCGGACT TCCTCGCCCG CTACCCCGAC
ATCGCCCTCG ACGTGGGCTG CACCGACCGG CCGGTGGATC TGCTCGGCGA GAACGTGGAC
TGCGTGATCC GCGTTGGCGA GATCCACGAC CCTAATCTGG TCGCCCGCCG CATCGGCGAG
CTGAGCTTCG AGGCGGTGGC AGCACCGGCT TACATCGCCC GATATGGCGT GCCCTCACAC
CCGAAGGAGT TCGAGGCCGG CCATGTGGTG GTCCGCTATT TCAGCGCGCT CACGGGGCGT
TACCACCCGT TCGAGTTCGT CCGGGGCTCC GAGGTGGTGG AAGTGACGGG CGACTACCGC
ATGGCCTGTA ACGATGGCAA CGCCTACATC GCCGCCGGCC TTGCCGGCCT CGGCGTGATC
CAGTCCCCCG TGTTCCAGGT GGAGGAGCAC CTCGCTTCCG GCGCGCTGGT GCGCGTGCTC
ACCGACTGGA CCGCGGGCGC CATGCCCATC CACGTGGTCT ACCCGCCGAG CCGCCACCTC
TCCAATCGCC TAAGGGTGTT CGTGGATTGG GTGGCGGAGC TGTTCGCCCG TTCCGACCTC
GCCCGCCGGG CGGCGTGA
|
|---|
| Protein sequence | MDQLAAMRAF VRVVETGNFT RAADLMDMPK ATLTKHVQSL EQHLRTRLFN RTTRRVTVTP
DGAAYYERAL LILNDLDELD GSLSTAQALP QGRLRIDLSP SLATRLLIPA LPDFLARYPD
IALDVGCTDR PVDLLGENVD CVIRVGEIHD PNLVARRIGE LSFEAVAAPA YIARYGVPSH
PKEFEAGHVV VRYFSALTGR YHPFEFVRGS EVVEVTGDYR MACNDGNAYI AAGLAGLGVI
QSPVFQVEEH LASGALVRVL TDWTAGAMPI HVVYPPSRHL SNRLRVFVDW VAELFARSDL
ARRAA
|
|---|
| |