Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0279 |
Symbol | |
ID | 5424149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 281048 |
End bp | 282712 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640879525 |
Product | diguanylate cyclase |
Protein accession | YP_001415194 |
Protein GI | 154244236 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.171809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0530924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAGC GTAGCGGCGA AGAGGCACCT GTCGCTTCGA GACGGCTTTC CAGCCTGCGC CTGCGCATTC TCTTTCTCAT TTGCCTCGTT GCCGTGCCCC TCTCCGTGGA GCGCCTCATG GCCCTCGTCG CGGATCGCCG GGACCAGATC CAGTCCCTCG AGGATGACGT GCGCGACTTG GTCCGCCGCG CCACGCTGGC CCAGCTCGAA GGGCTGACGC GGGCCCGCAC CGTGCTCGAC GTGGTGTCGC GGCAGGCGGA GGACCTGCTG GAAGATCCGG CGGCCTGCAT CCCTTTCGTG ACCCGGCTCG CCGACGAGGT GGCCGGCATC CAGGGCGTCT TCATCGCCAC CCCGGACGGC GACGTGAAAT GCGCCCACGC GCCGCTGGCC ATGGGCGTCA ACATCGCGGA TCGGCCGTTC TTCCAAGAGG CCCTCGCCGC CGAGGACATG CTCATGACCG AGCTGTCATT TTCACCGGTC AGCGGGCTCA ACTCCGTCTT CATGCTGCGC GCCGAGCGCG CGCCGGGGGG CAAGCCGCTG GCGGTGGCCG GCATCATCCT CGACCTGCAG TGGCTCTCGC GGATCGCCGC CGGCAGCGCG GTGGAATCGG GTGCGATCGT GGATGTGGTG GGCGAGGGCG GGACGGTGCT GGTGCGCTAT CCGACTTTGC CCGAGATCGT GGAGCACCGC TTTCCGGACC ATCCGCTGAC GCGCAAGATC ATGGCCGCGA AGGAAGGCGT CGTCACCACT ATCGGCTATG ACGGGAAGGA ACGGATCTTC GCCTTCAACC GCTTCGAGGG GCTGAATCTG CGCGTGGTGG TGGGCATGGA TACCGCCAAG GTCCTTACGC CCATCGACCG CAAGATCCAG ACCACGGCGT TCGTGCATTT TGCGGCGCTG GCCTGCTTCC TGCTGGTGTC GTGGTTCGCG GCCGAGCGCA TCATCATCAC GCCCATCGCT CGGCTGACGC GCTCCGTCGC CGCCGTCGGC CGGGGCGAGG CCGACCATGT GAAGGACAAC GACGTCACCG AGTTCGCCCC GCTGGTGCGG GCCTTCAACG AGATGGCCCG CCGCCTGTCC CAGCGCAACA GCGAGCTGCG CACCATGAAC GGGCGGCTCG CCTCCCTCGC CCGCACCGAC GGGCTCACCG GCCTCGCCAA CCGCCGCACC TTCGACGTGC AATTCTCCCA GGACTGGGTG CGCGCCCGCG GCGATGGCGC GCCGCTGACC CTGGTGATGC TGGATGTGGA CTACTTCAAG GCGTTCAACG ATGCGCGCGG CCACCTGTCT GGCGACGAGG CCCTGCGCGG GGTTGCGCGC ATGCTGTCGG CGGCGGCGGC GGGGACGAAG CATCTGGTCG CCCGCTACGG GGGCGAGGAA TTCATCGTGC TGATGTCCGG GGCGGACCTG GCCGAGGGCC TGGCGTTCGC GGAGGATGTC CGCGGTCTGC TGGGGGAGGT GGCCATCGCC CATCCAGCCT CGCCCCGCCG TCGCCTGACG GCGAGCTTCG GTGTGGCCAG CACCATTCCG ACGCAGGAGG GCAGCCCGGA CACGCTGGTG GCGGCGGCCG ATGCCGCGCT CTACGAGGCC AAGCGCTCCG GCCGGGACCG GGTGGTCGCC CACGCCGACC TGTACGCCAG CGGGGCGAAC GGCACCTTCC GTTAG
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Protein sequence | MVERSGEEAP VASRRLSSLR LRILFLICLV AVPLSVERLM ALVADRRDQI QSLEDDVRDL VRRATLAQLE GLTRARTVLD VVSRQAEDLL EDPAACIPFV TRLADEVAGI QGVFIATPDG DVKCAHAPLA MGVNIADRPF FQEALAAEDM LMTELSFSPV SGLNSVFMLR AERAPGGKPL AVAGIILDLQ WLSRIAAGSA VESGAIVDVV GEGGTVLVRY PTLPEIVEHR FPDHPLTRKI MAAKEGVVTT IGYDGKERIF AFNRFEGLNL RVVVGMDTAK VLTPIDRKIQ TTAFVHFAAL ACFLLVSWFA AERIIITPIA RLTRSVAAVG RGEADHVKDN DVTEFAPLVR AFNEMARRLS QRNSELRTMN GRLASLARTD GLTGLANRRT FDVQFSQDWV RARGDGAPLT LVMLDVDYFK AFNDARGHLS GDEALRGVAR MLSAAAAGTK HLVARYGGEE FIVLMSGADL AEGLAFAEDV RGLLGEVAIA HPASPRRRLT ASFGVASTIP TQEGSPDTLV AAADAALYEA KRSGRDRVVA HADLYASGAN GTFR
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