Gene Xaut_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0120 
Symbol 
ID5424556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp120876 
End bp122078 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID640879365 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001415036 
Protein GI154244078 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.702313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA TGGATCTCTT CGACGACGCC GACCTGCCCG CCGACGACGC GGGCGAGGAG 
GGGACTTCGA TCCTGTTGTC GGATCCCGAC ATCACCATGA TCGAGCTTCA GGCCGTGGCC
GAGGCCCTGC AGGCGCCGCG CCTGTCCAGC GGCCCGACCG CCGAGGCATT CGAGGCGGCG
TTCGCCGATT ACCTCGGCCG TAAATATGCG GTGGCCGTGC CGAGTGGCAC CATGGGCCTG
CTCTACACCC TCAGGGCCTA TGGCATCGGT CCGGGCGACG AGGTGATCTG CTCGCCCCAT
TCCTTCCGGG AGACGGTCCA CGCCGTGAGC CTGTCGGGCG CGCGGCCGGT GTTCGCGGAC
ATCGATTACT GGGCAGGAAC GCTGGTTCCT GAAAAGGCCG CGGCCAAGAT CACCGAGAAG
ACCAAGGCCA TCGTTGCCGG CAATGCCAAC GGCCATCCGG CGCCCTGGAC CGCCTTCCAG
GAGCTGGCGC GCGCGCACAA GCTCGTCCTC ATCGAGGATT CCACCGAGGC CATCGGCTCA
CGCTACAAGG ATGCGCTGGT TGGGTCGTTC GGCGACACAT CCGTGTTCGA TTTCTCACAG
CCCTTCCCGC TGGTGTGTGG CGAGGGCGGC ATGGTGGTGA CCGACGACAT CGACGTGGCG
GTGGGGCTGC GGCGCTTCCG AGCCCACCGG CTCGATGAGC GTTCGTCGGT GGTGGTCTCC
ATGAGCGCGC CCTACCAAGG TGCCATGAGC GACGTGACCG CGGCGCTCGG CCTCGCCCAG
CTGGGGCGGC TTGAGGAAAT TCTCGAGCAG CGGCACACGG TGGAGCATCT TTACCAGAAG
TACGTCCAGT CGTTCGAGGG CATCAAGGAT CCCTTCATCG GCCCGGACGT GACGGAGGTG
AACTGGTTTC TCTACGTGGT GCACCTGGGC ACCCGCTTCT CCAAGTCGAG CCGCGATGCC
ATCGTGGACG ACCTGAAGGT GGAAAAGGTG GAGTCGGCCG CCTACAGCGC GCCGCTTCAT
CTGCAGCGTC ATTACTTCGA CCTCGGCTAT CGCAAGGGCG ACTTCCTCGT GACCGAGAAG
GTGGCGGACC GGGCAATCGC CCTGCCGTTC CACACGCACC TGTCCGAGGA CGAAATCGAG
TTCATCGTCG CAACGATGAA GGATGCCTCG ATCAATGTAG GGGCGGGCGC CGCCATCTAC
TGA
 
Protein sequence
MSDMDLFDDA DLPADDAGEE GTSILLSDPD ITMIELQAVA EALQAPRLSS GPTAEAFEAA 
FADYLGRKYA VAVPSGTMGL LYTLRAYGIG PGDEVICSPH SFRETVHAVS LSGARPVFAD
IDYWAGTLVP EKAAAKITEK TKAIVAGNAN GHPAPWTAFQ ELARAHKLVL IEDSTEAIGS
RYKDALVGSF GDTSVFDFSQ PFPLVCGEGG MVVTDDIDVA VGLRRFRAHR LDERSSVVVS
MSAPYQGAMS DVTAALGLAQ LGRLEEILEQ RHTVEHLYQK YVQSFEGIKD PFIGPDVTEV
NWFLYVVHLG TRFSKSSRDA IVDDLKVEKV ESAAYSAPLH LQRHYFDLGY RKGDFLVTEK
VADRAIALPF HTHLSEDEIE FIVATMKDAS INVGAGAAIY