Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0007 |
Symbol | |
ID | 5421967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 8191 |
End bp | 8928 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640879252 |
Product | ABC transporter related |
Protein accession | YP_001414923 |
Protein GI | 154243965 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.726275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000259784 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCC GCATCCTCGA GGTGGACGGC ATCTCCAAGC GCTTCGGCGG CCTGCAGGCG GTCTCGCCGC TCTCCTTCCA CATGGAGCCG GGCGAGATCC TCGGCCTGCT CGGCCCCAAC GGCGCGGGCA AGACCACCGC CTTCAACATG ATCGCCGGGG CGCTGCGCAC CGACACCGGC GCCATCCGCT TCAGCGGCCG CGACATCGTG GGCGAGAAGC CGTGGGACAT CTGCCGCCTC GGCATCGCCC GCACCTTCCA GCTCTCGAAG CCGTTCGGCG GGCTCTCGGT GGTGGAGAAC GTGATGGTGG GCGCCTTCGT GCGCACGTCC TCCGAGTCGG AAGCCCGCGC CGAGGCCGAG AAGGTGGTGG ATTTTCTGGG CCTGTCCGCC AAAGCCTGCA CGGATGCGGA GGACCTCACC GCCTTCGACC GGCGCAAGCT GGAACTTGGA CGGGCGCTCG CCACCGGCCC GCGCCTGCTG CTGATGGACG AGGTGGTGGC CGGTGCCACG CCCACCGAGG CGCAGGAGAT GGTGGCGCTG GTGCGCCGGG TGCGCGACCT CGGCGTCTCC ATCCTCATCG TCGAGCACGT GATGAAGGTG ATCATGGGCC TGTCGGACCG GGTCATCGTG CTCGACTACG GCAAGCTCAT CGCCGACGGA CCGCCGCAGC AGGTGGTGAA CCAGCCCGAC GTGCTGAAGG CCTATTTCGG AGAGCGCTAT GTCCATGCCC GCGCTTGA
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Protein sequence | MSTRILEVDG ISKRFGGLQA VSPLSFHMEP GEILGLLGPN GAGKTTAFNM IAGALRTDTG AIRFSGRDIV GEKPWDICRL GIARTFQLSK PFGGLSVVEN VMVGAFVRTS SESEARAEAE KVVDFLGLSA KACTDAEDLT AFDRRKLELG RALATGPRLL LMDEVVAGAT PTEAQEMVAL VRRVRDLGVS ILIVEHVMKV IMGLSDRVIV LDYGKLIADG PPQQVVNQPD VLKAYFGERY VHARA
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