Gene Xaut_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0007 
Symbol 
ID5421967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp8191 
End bp8928 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID640879252 
ProductABC transporter related 
Protein accessionYP_001414923 
Protein GI154243965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.726275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000259784 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCC GCATCCTCGA GGTGGACGGC ATCTCCAAGC GCTTCGGCGG CCTGCAGGCG 
GTCTCGCCGC TCTCCTTCCA CATGGAGCCG GGCGAGATCC TCGGCCTGCT CGGCCCCAAC
GGCGCGGGCA AGACCACCGC CTTCAACATG ATCGCCGGGG CGCTGCGCAC CGACACCGGC
GCCATCCGCT TCAGCGGCCG CGACATCGTG GGCGAGAAGC CGTGGGACAT CTGCCGCCTC
GGCATCGCCC GCACCTTCCA GCTCTCGAAG CCGTTCGGCG GGCTCTCGGT GGTGGAGAAC
GTGATGGTGG GCGCCTTCGT GCGCACGTCC TCCGAGTCGG AAGCCCGCGC CGAGGCCGAG
AAGGTGGTGG ATTTTCTGGG CCTGTCCGCC AAAGCCTGCA CGGATGCGGA GGACCTCACC
GCCTTCGACC GGCGCAAGCT GGAACTTGGA CGGGCGCTCG CCACCGGCCC GCGCCTGCTG
CTGATGGACG AGGTGGTGGC CGGTGCCACG CCCACCGAGG CGCAGGAGAT GGTGGCGCTG
GTGCGCCGGG TGCGCGACCT CGGCGTCTCC ATCCTCATCG TCGAGCACGT GATGAAGGTG
ATCATGGGCC TGTCGGACCG GGTCATCGTG CTCGACTACG GCAAGCTCAT CGCCGACGGA
CCGCCGCAGC AGGTGGTGAA CCAGCCCGAC GTGCTGAAGG CCTATTTCGG AGAGCGCTAT
GTCCATGCCC GCGCTTGA
 
Protein sequence
MSTRILEVDG ISKRFGGLQA VSPLSFHMEP GEILGLLGPN GAGKTTAFNM IAGALRTDTG 
AIRFSGRDIV GEKPWDICRL GIARTFQLSK PFGGLSVVEN VMVGAFVRTS SESEARAEAE
KVVDFLGLSA KACTDAEDLT AFDRRKLELG RALATGPRLL LMDEVVAGAT PTEAQEMVAL
VRRVRDLGVS ILIVEHVMKV IMGLSDRVIV LDYGKLIADG PPQQVVNQPD VLKAYFGERY
VHARA