| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1309 |
|---|
| Symbol | sucA |
|---|
| ID | 2738795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 1248434 |
|---|
| End bp | 1251088 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637173458 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | NP_967017 |
|---|
| Protein GI | 42521102 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTT CAAGCTGCCT TTATGGTGAT AATGCAGAAT TTGTGGAAGA AATGTATAGC
CGTTATTTGC AGGGTGATAA ATCAATCGGG GAGGATTGGT ATAGAATTTT TTCAAGCAAT
TTAGAAGTTA ATAAAGCGGA GACCTGCGGT GCACAACATG TAACTAAGGT GGATGATTCA
GTTTCTAGTT TAGCAAATTT TTTCAGATCT TACGGTCATT TTTTTGCGGA TCTTAATCCG
TTATTACCCA ATGTGAATAA GGAAGTAGAT TATCAGAAAT ATTCGAATCT ATATCCGGCA
AGTGACGCTG GAATCTATAG AGATATTTAC TGCAAGAACA TCGGTTTTGA ATTTATGCAT
ATCTCCTCTT ATGAGGAGAG GATGTGGCTG CAGGAAAAGA TCGAAAATCA AACCTATACG
CTGAGTTCAC AAGATAAAAA GGAAATACTG AGGCACTTGA TCGAATCTGA GATGTTCGAG
CAATTTCTCC ATATGAAATT TCCTGGATAT AAACGCTTTT CTATTGAAGG TGGAGAATCA
GCTATCGTTG CAATTGAAAA AATCATTAGT GATTCTACGG TTTTTGGTAT TGAAGAAATA
GTCCTTGGCA TGGCTCACCG CGGACGACTC AATGTTCTAA CCAAAGTGAT GGGGAAAGAA
TATGCGGCAA TGCTGTCTGA ATTTCAAGGC AATCTTGCAT ACCCAAGTGG TCTTGAGGTG
TCCGGTGATG TTAAATATCA CCTTGGTTAC TCTTCTGATC GAGCACTTTC AGGTGGCAAA
AAAATACATT TAAGTTTATG CCCTAATCCA TCTCACCTTG AAGCGGTAAA TCCGGTTTTG
GCTGGAAGAA TAAGAGCAAA ACAGAATATA AGATCTGTGC TTGGCATATC AATTCATGGT
GATGCGGCTT TCATCGGTCA AGGAGTGGTT GCTGAAACTT TAACCTTAAG CAATATTGAA
GGCTATAAAG TGGATGGCAT TGTGCACATT GTCATTAATA ACCAAGTTGG TTTTACTGCT
AACCCATGTT GCGCACGATC CTCTTTTTAT TGCACTGATA TAGCAAAATC AATAGAAGCT
CCAGTGTTTC ACGTCAATGG AGATAACCCG GAAGCTGTGA GTTTTGCTAC AAGTCTGGCG
ATGGAATATA GGCAGAAATT TAAAAAGGAC GTAGTAATTG ACATAATGTG CTACCGCAAA
TATGGCCATA ATGAAGGTGA TGAACCGAAT TTCACTCAGC CACTTATGTA TAAGGCGATA
TCAAAGCATA AAACTCCTGG AACATTGTAT GAAGAAAAAT TGACTGCAGA GAAAGTATTA
GATGGCGATG AAGTAAATAA ATTGCGCAGT GAATTCAGGG CAAAATTAGA TAAAAGTCTT
GCTGAATCAG CGGCTTACAC TCCAAAAAAA GCTGACTGGT TCGGTGGAGT GTGGTCAAAA
TTAAGAAGAG CAAAGCTGAA CGATTTGAGC GAATACTACA CGGATTCTGG TGTTCCGCCA
GATGAGCTGA AAAAATTAGG TGTGCGTATA AATAGCAATA TCCCAAGTAA CTTTAACATT
AACAATAAGG TTAGAAAAAT ACTCGATGGC AGAATAGACA GCATAAATTT TGGTAGTAAT
ATAGACTGGG CAACTGCCGA AAGTCTTGCG TTTGCATCAC TGCTCACAGA AAGAATAGGA
GTGCGTTTAT CAGGACAAGA CTCTGGTCGT GGAACTTTCT CGCACCGTCA TTCAAGGCTT
GTTGATCAGG TAACAGAAGA AGCATTTATT CCGCTAAACA ATATAAATGA AAAGCAAGCT
CACTTTGAGG TCATAGATAG CGCACTATCT GAGTATGCTG TAATGGGCTT TGAATATGGA
TATAGTCTTG ATTCTCCGTA TTCACTGGTG CTCTGGGAAG GACAATTTGG TGATTTTGCA
AACGGTGCGC AAATTATGAT CGACCAGTTT ATCGCATCTG CAGAAACAAA GTGGTTGCGA
TCAAGCGGTC TAGTTTTATT GCTGCCTCAT GGTTATGAAG GACAGGGACC TGAGCATAGC
TCCGCACGTA TAGAGAGATT TTTGCAACTC TGCGCAGAGG ATAATATGCA GGTAGTTAAT
TGTTCCACTC CGGCGAATTA CTTCCATGTC TTACGCAGAC AAATGCATAG AGACTTTCGT
AAGCCTCTGG TAGTGTTTAC ACCTAAATCG CTACTGCGCC ACAAAAGAGC AGTATCTAAC
CTATCTGATT TTGAAGGAAA ATTCCTCACA GTAATTCCAG AATGTAGAAC AGGTTTAGTT
TCGAATGATA AAATACGTAA AGTTGTAATA TGCAGTGGTA AAGTTTATTA CGACATATGT
GAAGCACAAA AAATAAACGA TATAGCAGTA ATACGTTTGG AGCAATTCTA TCCTTTTCCT
GCAGATAAAC TAAGTAATGA ACTTGAAAAG TACAAAAACG CTGAAATTAT ATGGTGTCAA
GAAGAACCAA AAAATATGGG AGGATGGTTT TTTGTCAACC CATTGATAGA AGAAGTGTTA
TCTAATCTCG ATATCCAAGC AAAAAGACCT AAGTGTATCG CAAGACCTGC TGCTGCATCT
CCTGCATGTG GTTATGTTAG TGTTCACACT CAGCAGCAGG AGGAGATTTT AAAGCAGGTT
ATGCAGGGGA TCTAG
|
|---|
| Protein sequence | MSSSSCLYGD NAEFVEEMYS RYLQGDKSIG EDWYRIFSSN LEVNKAETCG AQHVTKVDDS
VSSLANFFRS YGHFFADLNP LLPNVNKEVD YQKYSNLYPA SDAGIYRDIY CKNIGFEFMH
ISSYEERMWL QEKIENQTYT LSSQDKKEIL RHLIESEMFE QFLHMKFPGY KRFSIEGGES
AIVAIEKIIS DSTVFGIEEI VLGMAHRGRL NVLTKVMGKE YAAMLSEFQG NLAYPSGLEV
SGDVKYHLGY SSDRALSGGK KIHLSLCPNP SHLEAVNPVL AGRIRAKQNI RSVLGISIHG
DAAFIGQGVV AETLTLSNIE GYKVDGIVHI VINNQVGFTA NPCCARSSFY CTDIAKSIEA
PVFHVNGDNP EAVSFATSLA MEYRQKFKKD VVIDIMCYRK YGHNEGDEPN FTQPLMYKAI
SKHKTPGTLY EEKLTAEKVL DGDEVNKLRS EFRAKLDKSL AESAAYTPKK ADWFGGVWSK
LRRAKLNDLS EYYTDSGVPP DELKKLGVRI NSNIPSNFNI NNKVRKILDG RIDSINFGSN
IDWATAESLA FASLLTERIG VRLSGQDSGR GTFSHRHSRL VDQVTEEAFI PLNNINEKQA
HFEVIDSALS EYAVMGFEYG YSLDSPYSLV LWEGQFGDFA NGAQIMIDQF IASAETKWLR
SSGLVLLLPH GYEGQGPEHS SARIERFLQL CAEDNMQVVN CSTPANYFHV LRRQMHRDFR
KPLVVFTPKS LLRHKRAVSN LSDFEGKFLT VIPECRTGLV SNDKIRKVVI CSGKVYYDIC
EAQKINDIAV IRLEQFYPFP ADKLSNELEK YKNAEIIWCQ EEPKNMGGWF FVNPLIEEVL
SNLDIQAKRP KCIARPAAAS PACGYVSVHT QQQEEILKQV MQGI
|
|---|
| |