Gene WD1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1274 
SymbolispH 
ID2738909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand+ 
Start bp1215436 
End bp1216365 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content36% 
IMG OID637173425 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionNP_966984 
Protein GI42521069 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0947583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA TCTTAGCTGA ACCACGAGGT TTTTGTGCCG GGGTAAAAAG AGCTGTGGAC 
ATATTAGCTA TTACTTTAGA AAAATACAAA AACGAGCGCC AAGTTTATGT GCTACACGAA 
ATTGTTCACA ATAAATATAT AGTAGAGGAC TTTAAGAAAC AAGGAGTGGT TTTTGTAAGC 
AGTATCGAGG AAATTGAAGA TAATGAAGGA ATACTGATCT TCAGCGCGCA CGGAGTATCA 
AAAAATATAG AAGATGAGGC AAAAAGAAAG GGTATTCAAG TGATTGATGC AACATGTCCT 
TTAGTCAACA AAGTGCATAA AGAAGCAAAA AGGTATGAAA ACAGTGGTAA AGAATTAATT 
CTCATTGGGC ATGAAAACCA TCCAGAAGTT AAGGGAATTA GGGGAAGAGT AAACAATCCT 
ATCACTTTAG TGCAAACTTT GCAGGATGTA TATGATTTAA AGGTTAAAGA TCCAGATAAT 
TTGTCTTATG TTACACAAAC TACGTTAAGC ATCGACGATA CCCGTGACAT TATTGCTGCC 
TTGAAATTAA GGTTTCCAGG CATAACAGGT CCAGATTTAA AGGACATATG CTATGCAACG 
CAAAACAGAC AAAATGCTGT TAAAAAGCTA GCTGAAATTG TAGACATGGT ATTAGTTGTA 
GGAAGTAAAA ATAGCTCAAA TTCAAACCGC TTATTAGATC TGTGCACTGC CAGAGGAAAA 
AGAGCCTACT TGATTGATAA TTACAGCTGT GTGAATAAAA GCTGGTTTCA GGGCGTAGAA 
AAGATAGGAA TCACCGCAGG TGCTTCCGCT CCTGACATAT TAGTTGATGA ATTAATAGAC 
TACCTAAAAG TAAACCTGAG TGTAAAAATT TCAGTTATGC CAGGTGGTAT TACTGAAAAT 
GTTCAGTTTA AAATACCGAA TCTGGTTTAA
 
Protein sequence
MEIILAEPRG FCAGVKRAVD ILAITLEKYK NERQVYVLHE IVHNKYIVED FKKQGVVFVS 
SIEEIEDNEG ILIFSAHGVS KNIEDEAKRK GIQVIDATCP LVNKVHKEAK RYENSGKELI 
LIGHENHPEV KGIRGRVNNP ITLVQTLQDV YDLKVKDPDN LSYVTQTTLS IDDTRDIIAA 
LKLRFPGITG PDLKDICYAT QNRQNAVKKL AEIVDMVLVV GSKNSSNSNR LLDLCTARGK 
RAYLIDNYSC VNKSWFQGVE KIGITAGASA PDILVDELID YLKVNLSVKI SVMPGGITEN 
VQFKIPNLV