| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4945 |
|---|
| Symbol | |
|---|
| ID | 4694888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5466147 |
|---|
| End bp | 5469533 |
|---|
| Gene Length | 3387 bp |
|---|
| Protein Length | 1128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639852681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_999650 |
|---|
| Protein GI | 121611843 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.451104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTT CGCAACCTGT CGTCGTTGCC AAGGATCCCG CGGCAGAAGC GCCGGCCGCG
CCTGCCATTC CTGCTGTCGA CGAACCCGAC GCGCCGCGTC CGCCGGAAAC CGTCGCTGCC
CCTGCGCCGG TCGTCGGGCC GCCGCTGGTT CACCGCCCTC CCCCGCCACC GGTCCCGCTG
CGCGACCGCC TGCCTGCGCC GATCGCCAAC CTGATCTTCA ACGGCAACAT GCTGGTCAAG
CTCGGCGTGC TGATCCTGTT CCTCGGCCTG GTTTTCCTGC TGCGCTACAC GGCCGAGCGC
GTCACGGTGC CGATCGAACT GCGCTACGCC GCAGTCGCGC TGGTGGGCGC GGGCCTGCTG
GTGCTGGGCT GGCTGCTGCG CCACAAGCGC GCGGGCTATG CGCTGATCCT GCAGGGCGCG
GGCATCGGCG TCTTCTATCT CACGACGCTC GCGGCCATGA AGTTCGGCGG CCTGCTGTCG
ACCAGCGTGG GCTTCGCGTT CCTGTTCGGC GTGGCGGTGC TCAGCGCCGC GCTGGCCGTG
CTGCAGAACG CGCCGCTGCT GGCCATCGTG GCCGCGCTCG AAGGCTTCGC CGCGCCGGTG
CTGGCATCGA CCGGCTCGAA CCAGCCGGTA GGCCTGTTCA CCTACCTGCT GGTGCTCGAC
GTGGGCATCG TGCTGATCGC GTGGTTCAAA GCCTGGCGCG TGCTCAACCT GATCGGTTTC
GTGGGTACCT TCACGCTCGC GTCCAGTTGG GCGCACAAGT ACTACACCGA CGACCAGTAC
GGCACCGTGC AGCCGTTCCT CGTCGTGTTC TTCCTGCTGT TCACCGCCAT CGGGTTGTTC
TTCGCGCGCC GCACGCTGTT CGATGCGCCG GTGCAGCCCG CGCAGCCGCT CGCGACGCGC
GCGCTCGACA CGCTGCGCCG CGCCGGCCGG GTCGACAGTT CGCTGGTGTT CGGCACGCCG
ATGGTCGCAT TCGGCATGCA GTACCTGCTG ATGCGCCCGT GGGAATACGG CGCCGCCTTC
TCGGCGATGG CGCTCGCGGC CCTCTATCTC GTGCTGGGCC GGCTGGTGTT CGCCTCGCAG
CCCAAGGGCC TCGCGCTGCT GGCGGAGGCC TATGCCATCG TCGGCGTGAT CCTCGGCACG
CTTGCGATTC CGCTCGGCCT CGAAGGGCAG TGGAGCAGCG CGACATGGGC GGTCGAGGCG
GCCGGCATGT ACTGGCTGGG CGCGCGGCAA GGGCGCGTCT ACGCGCGTGC CTTTTCGTTC
CTGGTGTTCG CGGGTGCGGT GTGGAAGCTG CTCGAAGCCA CGCAACTCGA CGGGGCGGCA
GGGCATCCGC TGCTGCAGGG CTCCGTGATC GGCCCGCTGC TGGTGGCAGC GAGCGCCTTC
GCGATGTGGG CCATGCAGCG TCGCGCGAAG CTCGACGAGG GCGACAGCCT CGAAGCCATC
GTCGGCAGCG CCTTGCCGTG GTTCGGCATG GCCGCGCTCA CGCTGCTCTT GTGGCAGTGG
TTCATGCCGC CCTGGGCCGC GGCCGCGACG GCCGTGCTGG CTTCGGTCAC CTTTGCCGTC
GCCGTGCGCT TCGCGTTGCT GCCACTCACC TCTGTGAGTT TCGGCATGCA AGCGCTGGCA
GTGGTGGTTT TCATCACCAC GCTGCATCGC ACAGGCGATG GGCTCGATGC CAAGCAGGCG
CTCGAAAGCG GCTGGCAAGG CGCTGCGGCC GCCTGCCTGA TCGCGTTCAG CGTGCTCGGC
AGCGCCGCCT GGTCGATGTC GCAGGCGCAT CGCGCGGCAC GGGCGCGCGG CGTGCAGCCT
GTGTGGTCGA CCGGCAATGT GGTGAGCGTG ATCGCGGGCG TGGGTCTGCT GCACCTTGCG
ATGCTGTTCC AGATCAGCCT CACCCAGGCC GCGCTGCTGT GGCCGCTGAC CGCCACCGTC
GTGCTGTGGG TGGCGCTGCG CATGGCGCAC CTGCCGCTCG CGGCGTTCGC GGGCGTGCTG
CATGCGGTCT CGTCGATCCT CTTCATCGTG CTGGCAGTGA TGGGGGGCGA CATGCGCGTG
TTGCGCCCCG CCTTCGGGCA TCTCGGCTTC TGGACGCCGG TGGTGCTGGG CCTGACGGCG
CTCTTGGCCG GCGACTGGTT GCGCGACGAG GCGCGGCCGC GTGCGGGCGA GCCCATCGGC
GTGGCGCGCA AGCGCTGGGT CGATGCCTGG TGCACCAACC CTGTCGTGCC GTGGGTGCCC
GTGATCTGGG GCCTGGGCTG GTGGCTGTTC GGCATGCTGG GCGAAAGCGT CCGGGTGCTG
AACCTCCACG CGCTGGCGAG CCATATGCCG GCGGCCGTCA TGGCGGTGGT GCTCGTGACG
TCCGTGCTGT CTGCGCTCGT GGCGCACCGG CGCGACTGGC CGCAGCTCGG TCAGGCGACG
AGCGCCACGC TGCCCGGCTT CAGCCTGATC GCCGTCTACG GCATCGCAGG CGAGCCGACG
CCGTTCTACG TGCCGTCGAG CGCGCTCGGC TGGATCGCGT GGCCGCTGGC GCTGGTGTGG
CACCTGCGCC TGCTGCGCGC GCAAAAGCGC TGGTTCGATG CATCGACGCT GACGCCATTC
CACGTTGCGG GCTTCTGGCT CTTCCTGCTG CTCGCAGCGC GCGAATGTCA ATGGCAGCTC
GGCCGCATCG GCGCCGAGTG GTCGAACTGG CAACTGCTGG GCTGGGCCAT CGTGCCGGCG
CTCGCGCTGT GGGCACTGCG CTCGCGCGTG CTGCTGCAGC GCTGGCCGCT CAGCGAGTAC
CGCAGCGCCT ACCTGGAGTT CGCCGTGACA CCGGTGGCGG TGTACCTGCT CGCATGGGTG
TGGGTGACCA ACGCCGCCAG CCCTGGCGCT GCGGCGCCGC TGCCTTATGT GCCGCTGCTC
GATCCGCTCG AACTCGCGCA ATGGCTCGTG CTATTCGCGC TGCTGCTCTG GTGGCGCGCG
CTGCCGCAGG GCTCGTTCGC GCGCGTACAG CCAATGGTCG CCAAGGGCGC CGTCGGCTGC
ACCGGCCTCG CACTGCTGAC CGGCATGGTG CTGCGCACCT GCCATCACTA TGCGGGCGTC
GAATGGCGCT TCGACACGCT CTATGCCTCG TGGCTCACGC AGGCGGCGTT GTCGATCACC
TGGGCAATCT GCGGTGTGGT CGCGATGGTG CTCGGCCACG GGCGCCGGGT GCGCACGCTG
TGGATCGCGG GCGCCGCGCT GCTCGGCGTG GTGGTGTTGA AGCTGTTCTT CGTCGAACTG
GCGGACCGCG GCGGGCTGTT CCGCATCGTG TCGTTCATTG CGGTCGGCGC GCTGCTGCTG
CTGGTCGGGT ACTTCGCGCC TGTGCCGCCG AAGAAACAAG AGGCGGGGCC GAAGGAAGAG
GCGCCGGCTG AAGGAGGCGC GGCATGA
|
|---|
| Protein sequence | MQVSQPVVVA KDPAAEAPAA PAIPAVDEPD APRPPETVAA PAPVVGPPLV HRPPPPPVPL
RDRLPAPIAN LIFNGNMLVK LGVLILFLGL VFLLRYTAER VTVPIELRYA AVALVGAGLL
VLGWLLRHKR AGYALILQGA GIGVFYLTTL AAMKFGGLLS TSVGFAFLFG VAVLSAALAV
LQNAPLLAIV AALEGFAAPV LASTGSNQPV GLFTYLLVLD VGIVLIAWFK AWRVLNLIGF
VGTFTLASSW AHKYYTDDQY GTVQPFLVVF FLLFTAIGLF FARRTLFDAP VQPAQPLATR
ALDTLRRAGR VDSSLVFGTP MVAFGMQYLL MRPWEYGAAF SAMALAALYL VLGRLVFASQ
PKGLALLAEA YAIVGVILGT LAIPLGLEGQ WSSATWAVEA AGMYWLGARQ GRVYARAFSF
LVFAGAVWKL LEATQLDGAA GHPLLQGSVI GPLLVAASAF AMWAMQRRAK LDEGDSLEAI
VGSALPWFGM AALTLLLWQW FMPPWAAAAT AVLASVTFAV AVRFALLPLT SVSFGMQALA
VVVFITTLHR TGDGLDAKQA LESGWQGAAA ACLIAFSVLG SAAWSMSQAH RAARARGVQP
VWSTGNVVSV IAGVGLLHLA MLFQISLTQA ALLWPLTATV VLWVALRMAH LPLAAFAGVL
HAVSSILFIV LAVMGGDMRV LRPAFGHLGF WTPVVLGLTA LLAGDWLRDE ARPRAGEPIG
VARKRWVDAW CTNPVVPWVP VIWGLGWWLF GMLGESVRVL NLHALASHMP AAVMAVVLVT
SVLSALVAHR RDWPQLGQAT SATLPGFSLI AVYGIAGEPT PFYVPSSALG WIAWPLALVW
HLRLLRAQKR WFDASTLTPF HVAGFWLFLL LAARECQWQL GRIGAEWSNW QLLGWAIVPA
LALWALRSRV LLQRWPLSEY RSAYLEFAVT PVAVYLLAWV WVTNAASPGA AAPLPYVPLL
DPLELAQWLV LFALLLWWRA LPQGSFARVQ PMVAKGAVGC TGLALLTGMV LRTCHHYAGV
EWRFDTLYAS WLTQAALSIT WAICGVVAMV LGHGRRVRTL WIAGAALLGV VVLKLFFVEL
ADRGGLFRIV SFIAVGALLL LVGYFAPVPP KKQEAGPKEE APAEGGAA
|
|---|
| |