Gene Veis_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4517 
Symbol 
ID4693852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4997940 
End bp4998842 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID639852262 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999234 
Protein GI121611427 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.177688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCC GACGCGCCAG GAGCGAGGGG AACTCCCGCC TGGATTTCAT CAGCGTGTCC 
TTCACGCTCG TGGTCTTGGT CTTCATCGTG GTCATGATCA TCCCGGTGGC TTGGGCGATT
TTGCTGGGCT TCACGCACAG CGGTCCGTTT CAGGCCGGCA CGACCTACGC GGGGCTGGAC
AACTACCGCG CCGTGCTGGC CGATCCGGCG TTCTGGCGCG CGCTGGGCAT AGGTGCCAGC
TATGCAATGC TTACCACCGC GTTGGAAATG GTGTTGGGCG TGGGCATCGC CATCTTGCTG
TTCAAGTCGG GCCAACCGAT CTTCACCAGC CTCGCGCTAC TGCCCTACAT GATTCCGACG
GTCACCACGG CGCTGGTTTG GCACTGGATG ACCAACAACC TCTACGGCAT CGTCAATCAT
CTGCTGCTCC AAAGCGGGTT GGCCGACATG CCGGTTGATT TCGCAGGGCA CGGCGCCTGG
GCTTTCGGCC TTGTCACGGT GGCCAGCGTC TGGCAGTTCA CGCCCTTCGT GATTCTGGTG
ACCTTATCAA ACCTCGGCAC GATCGAGCGC AGCGTCCATG AAGCCGCATA CATTGACGGG
GCCAACTGGT GGCAGCAGGT AGCGCGCATC ACGCTGCCCA TCATCCGCAC CTCGATCTTG
TTGATATTGC TGTTGCGCGG CATCTGGATG TTCAACCGAT TCGACGTGAT CTGGCTCTTG
ACGGCCGGCG GGCCGCTCGG AGCCACGAGC ACATTGCCGA TTTACGCTTA CGAGCGCGCC
TTTGGCGACA ACAGCTATGG ACCAGCGGGC GCCACCTCGA CCATCATCTT CGGCATTTTA
CTGGTGCTGG GTATCGTCTA TATGCGCCTG TTCCAGCCCG ACAAGGAGGT CGCCCGTGGC
TAA
 
Protein sequence
MRSRRARSEG NSRLDFISVS FTLVVLVFIV VMIIPVAWAI LLGFTHSGPF QAGTTYAGLD 
NYRAVLADPA FWRALGIGAS YAMLTTALEM VLGVGIAILL FKSGQPIFTS LALLPYMIPT
VTTALVWHWM TNNLYGIVNH LLLQSGLADM PVDFAGHGAW AFGLVTVASV WQFTPFVILV
TLSNLGTIER SVHEAAYIDG ANWWQQVARI TLPIIRTSIL LILLLRGIWM FNRFDVIWLL
TAGGPLGATS TLPIYAYERA FGDNSYGPAG ATSTIIFGIL LVLGIVYMRL FQPDKEVARG