| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4509 |
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| Symbol | |
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| ID | 4694210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4989418 |
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| End bp | 4991100 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639852255 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_999227 |
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| Protein GI | 121611420 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CCAAGAACGC GCTCGTCCGC ACGCTGCTCG AATGTGACGC CACCCATGCA
TTCACCTTGC CGGGCCTGGG CATCACATGG ATGCTCGATG AGTTCCATGG GGTGCGCGAC
CGCTTGCGTG TCGTGCTCAC GCGCAGCGAG CAGATCGCCT CGGTCATGGC GCAGGTCTAT
GGCAGGCTGA CCGGGCGTCC GGGTGTCTTC ATGGGACAGG GGCCCTTTGC GGCCAGCACG
GGCGCCTTCG GTATTTTGGA AGCGCACTTT GCCGGCTCGC CGATGGTGGT GCTGACCGAC
ACCTCCTGCT ATGACGGCTT TGGCATGTAC GGCGTCTATC AGACCATGAC GGGCGACTAC
GGCGCTGCGG ACGTGCGCAC GGTCATGGGC ACGATGACCA AGTACACCGG TTATGCGACC
GAACCCCATG AGGCGGTGTA CGGCTTGCAG ATGGCTTTCA AGCACGCACA ACTGCCGCGC
ATGGGCCCGG CCGCGCTGGT GCTGAAGTCG CCCATCATCC GGCGCGAGAT GCAGGACGAC
CCGCGCGTCC ATCTCCATCC TTCAGAGGGC TACCTGCGCC ACACCCCGGC ACGCCCCGAT
GCCAATGGCG TCGCCCATCT GGCGCAGATG ATCGCAGAGG CCCGCAACCC GGTCATCCTG
GCCGGGCAGG GCGTGCAGAC CGATCGGGCG CGCGCCTTGC TGGCACTGGT CGCGCAAAAG
GCCGGTCTGG CGGTGGCCAC CAGCTATAAC GGCAAGGGGG TGATCGACGA AACGCTGCCG
GTCGCGGTGG GCATGCTCGG AACCTGGGGC AGCCGCAGCG CCAACCGCAT GCTTGGCGGC
GCTGACCTGG TGGTGGCACT GGGTGCCAGC CTCGGGCCGG ACTACCTGCG TTTCCGCGAC
AAGGGTTTGA TCGAGCCGGG CCGCCAGCGC ATCGCCCATG TCGACATCGA TGCGCGCCAT
GCCGGCTGGG TCTACCCGGT CGATCATGCG CTCACGGGTG ACGCCGCCGA TGTGCTGGAG
ATGCTGGCCG ACAAGTGCCT GGGCGAGGAA AACAAGCAGG CGCGTCTCGG CAAGATCGCG
CAGAACAACC AGGAACACGG CTTCGGCGTC ATGCCACCGA CCGAGGCCGC CAGCGGCACG
CTGCACTACG CCGACATGGT GCGCGTGCTC GACCGCGTGC TCACGCCGCA GGACATGCTG
GTGCTCGACG CGGGCAACAG CCGCATCTGG GTCACCAGCA TGTTGCGCCT GCGGACCCCC
GGCCAATTGG TGGTCCCCGG TGGCATCGGC GGCATGGGCT GGGGCCTGCC GGCGGCGGCA
GCGACCAAGC TCGTCCATCC GGAGCGCAAC ACCATCTGCG TGATCGGCGA CGGCGGCGCG
GCGATGACGC TCAGCACGCT CGCCACCTGC GTACAGGAAC ACCTGCCGAT CACCGTGGTC
GTGGCCAACA ACCAGGGCCT GGGCATGGTG CGCGACAACA TGAAGGGCCG CCGCATCGCA
GTCGATTTCT CGCCGATGGA CTTTGCGCAG ATCGCGCGCG GCATGGGTTG CATCGGCGTT
CGCGTCGACA AGGCCGATGC GCTGGAAGAC GCCATCGCAG CCGCCCGCAG CGCCGATCTG
CCGACGGTCA TCGACCTGGC CATCGACCCT GCGGCCAGCC ACATCGCGGC CTCGGACTAC
TGA
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| Protein sequence | MTTTKNALVR TLLECDATHA FTLPGLGITW MLDEFHGVRD RLRVVLTRSE QIASVMAQVY
GRLTGRPGVF MGQGPFAAST GAFGILEAHF AGSPMVVLTD TSCYDGFGMY GVYQTMTGDY
GAADVRTVMG TMTKYTGYAT EPHEAVYGLQ MAFKHAQLPR MGPAALVLKS PIIRREMQDD
PRVHLHPSEG YLRHTPARPD ANGVAHLAQM IAEARNPVIL AGQGVQTDRA RALLALVAQK
AGLAVATSYN GKGVIDETLP VAVGMLGTWG SRSANRMLGG ADLVVALGAS LGPDYLRFRD
KGLIEPGRQR IAHVDIDARH AGWVYPVDHA LTGDAADVLE MLADKCLGEE NKQARLGKIA
QNNQEHGFGV MPPTEAASGT LHYADMVRVL DRVLTPQDML VLDAGNSRIW VTSMLRLRTP
GQLVVPGGIG GMGWGLPAAA ATKLVHPERN TICVIGDGGA AMTLSTLATC VQEHLPITVV
VANNQGLGMV RDNMKGRRIA VDFSPMDFAQ IARGMGCIGV RVDKADALED AIAAARSADL
PTVIDLAIDP AASHIAASDY
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