| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4455 |
|---|
| Symbol | |
|---|
| ID | 4694089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4922853 |
|---|
| End bp | 4923608 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639852203 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_999175 |
|---|
| Protein GI | 121611368 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0350682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCT GGCAAACCCT TTTCTGCAAG GAAGTGCTGC GCTTTTGGAA GGTCAGCTTC
CAGACCGTGG CCGCGCCGGT GCTGACCGCC GTGCTGTACC TGCTGATCTT TGGCCATGTG
CTCGAAGATC ATGTGAAGGT CTACCAGCGC ATCAGCTACA CCGCCTTCCT GGTGCCCGGC
CTGGTGATGA TGAGCGTGCT GCAAAACGCT TTTGCCAATA GTTCGTCGAG CCTCGTCCAG
AGCAAGATCA TGGGCAGCCT GGTGTTCTTG CTGCTCACGC CGCTGTCGCA CCGGGCCTGG
TTCGTGGCCT ATGTGGGCTC GTCGATCGTG CGCGGGCTGG TGGTCGGGCT GGGGGTGTTC
ATCGTCACGC TGGCGTTTGC GGTTCCCGAA TTCGCCGCGC CGCTGTGGAT CATCGTTTTT
GCGTTGCTCG GGGCGGCGCT GCTGGCCACC CTGGGGCTGA TCGCCGGCCT GTGGGCGGAC
AAGTTCGACC AGATGGCGGC GTTCCAGAAC TTCATCATCA TGCCGATGAC CTTTTTGTCG
GGCGTGTTCT ATTCGATACA GTCGCTGCCG CCGTTCTGGC AGACGGTCAG CCACCTGAAC
CCGTTCTTCT ACATGATCGA CGGCTTTCGT TACGGCTTTT TTGGCCAGAG CGACGTTTCG
CCCTGGCTCA GTCTGGCCAT CGTCGGCGCA GCCTGGCTGG CCGTGGCTGC ATTGGCCATG
CAGTTGCTGC GCACCGGCTA CAAAATCCGC CACTGA
|
|---|
| Protein sequence | MTGWQTLFCK EVLRFWKVSF QTVAAPVLTA VLYLLIFGHV LEDHVKVYQR ISYTAFLVPG
LVMMSVLQNA FANSSSSLVQ SKIMGSLVFL LLTPLSHRAW FVAYVGSSIV RGLVVGLGVF
IVTLAFAVPE FAAPLWIIVF ALLGAALLAT LGLIAGLWAD KFDQMAAFQN FIIMPMTFLS
GVFYSIQSLP PFWQTVSHLN PFFYMIDGFR YGFFGQSDVS PWLSLAIVGA AWLAVAALAM
QLLRTGYKIR H
|
|---|
| |