Gene Veis_4434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4434 
Symbol 
ID4694378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4896276 
End bp4896989 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID639852183 
Productriboflavin synthase subunit alpha 
Protein accessionYP_999155 
Protein GI121611348 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.563917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0752647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAG GCATCGTCCA AGCCATCGCC CGCATCGCCG CCATCCACGA CAGCACGGAC 
CTGCGGCGCC TGACCCTCGA ATTTCCGGCC GGTTTTTGCC AAGACCTGGG CCTGGGCGCC
AGCGTGTCGG TCGATGGCGT ATGCCTGACG GTCAGCGCGC GGCCCACGCC GACATCGGCC
ATGTTCGATC TGGTACGGCA AAGCCTGAAC GTGACCACGC TGGGCGGCTA TGCGCAGGGC
GAGCGCGTGA ACGTCGAGCG CGCGGCCCGG TATGGCGCAG AGATCGGCGG GCACCCGCTG
TCAGGCCATA TCGACTTTGC GGCCACACTC ATCGACAGGC GCGCCTCGGA CGACAACCTG
GTCTGGCGTG TGGCCATTGC GCCCGACATG CGCAAATACA TCTTTGCCAA GGGCTATGTC
GCCGTCCATG GCGCCAGCCT CACGGTGTCT GAAGTCAACC GCGCCGAAGG CTGGTTCGAG
GTCTGGCTGA TCCCCGAAAC CCGCCGCGCC ACCGTGTTGG CCGACAAGCG GGTCGGCGAC
CGCCTGAACA TCGAAATCGA GCGCAGCACC CAGGTGATGG TGGATACCGT GCGCGCAGCC
GTGCACGAAA GCCTGGGCCG CCTGCAACCG CTGCTGCAAG CACTGCTGCA AGAAAAAGGC
CTGGCGCTCG AAGACTTCGT GCCGCCGCCC ACGCCGCCCA CGCCGCCGCG CTGA
 
Protein sequence
MFTGIVQAIA RIAAIHDSTD LRRLTLEFPA GFCQDLGLGA SVSVDGVCLT VSARPTPTSA 
MFDLVRQSLN VTTLGGYAQG ERVNVERAAR YGAEIGGHPL SGHIDFAATL IDRRASDDNL
VWRVAIAPDM RKYIFAKGYV AVHGASLTVS EVNRAEGWFE VWLIPETRRA TVLADKRVGD
RLNIEIERST QVMVDTVRAA VHESLGRLQP LLQALLQEKG LALEDFVPPP TPPTPPR