Gene Veis_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4354 
Symbol 
ID4694232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4797478 
End bp4797912 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID639852099 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_999075 
Protein GI121611268 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.465817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.226186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA CCGCCCCCGA ACGGCCAGAA TTTCGCAACC TCCACCTCTT GCAGGACCTG 
AGAACCTACC GCTTGCCGGC GGCCGGCTGG GTCTCCATCC TGCACCGCGT CAGTGGCTTG
GCCATGTTCT TGCTGCTGCC GTTCATCGTC TGGATGTTCG ACACCTCGCT GTCGTCTGAA
ATCTCGTTCG CCAGGTTCAC CGCCATCTTC AAGGCCGGCG CCGGTGTCGT GCCTGGCTGG
TGCTTCAAAC TGCTGGCCTT GGCGCTGATC TGGTCCTTTC TGCACCACTT TTGCGCCGGA
TTGCGCCATC TGTGGCTGGA CATCCACCAC GCCGCCGCCA CCAGGGAATT CGGCAGAAGA
TCGGCGCTGG CCGTGCTGGC GCTCAGCCTG GCCCTGACCC TGGTGCTGGG CGCCAAGCTG
TTCGGAATGT ATTGA
 
Protein sequence
MTKTAPERPE FRNLHLLQDL RTYRLPAAGW VSILHRVSGL AMFLLLPFIV WMFDTSLSSE 
ISFARFTAIF KAGAGVVPGW CFKLLALALI WSFLHHFCAG LRHLWLDIHH AAATREFGRR
SALAVLALSL ALTLVLGAKL FGMY