Gene Veis_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4110 
Symbol 
ID4694216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4509081 
End bp4509800 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID639851857 
ProductABC transporter related 
Protein accessionYP_998833 
Protein GI121611026 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.389501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCT ATGTGTTGCA AGCCGAGGAT GTGGCCATCC ATTACGGCGG CACCAAGGCC 
CTCGACGGTG TTGCGCTGAC CTTGGAGAAA GCCCAGATTC GCGGGCTGAT CGGCCCCAAC
GGCGCCGGAA AATCCACGCT CATCGATGCC ATCACCGGCC GGCGCCGCCT GGCCCGGGGC
AAGGTCATCC TCCACGGCGA GGATGTCAGT CGGCTGGGCA CCGTCGAGCG CCGCCAGCGG
GGGCTGTCGC GCAGCTTTCA ACGGACCAGC ATCTTTGCCG GCATGACCGT CCTCGCGCAG
GTGGAACTGG CGTCGCACGA GATGGGCGTC GAAAACTCTG CCGCCGATGC GCGCGCGGTG
CTGGAAGAAT TGAACCTCGC CAGCCTGGGC CACAGGCTGG CCGGCAACCT GGGCTACGGC
GAGCAGCGCC GCCTGGACCT GGCGCTGGCC CTGGTCGGAC GCCCCAAGCT GCTGATGCTC
GACGAGCCCA TGGCCGGGCT TTCCGTCAAG GAGTCGCTGG ACCTGGCGCA GCACCTGAAG
GCCCTGGCCT CGCGCCGGGA CATCGCCGTA TTGCTGGTGG AACACGACAT GGACGTGGTC
TTTGGCATCT GCAGCGTCAT CACCGTCTTC GAACTGGGCC GGGTCATCGC CGATGGCGCA
CCGGCCAGCG TGCGCGCCAA CCGGCGGGTG CGCGAGGCCT ATCTGGGAAG CGCAGCATGA
 
Protein sequence
MTPYVLQAED VAIHYGGTKA LDGVALTLEK AQIRGLIGPN GAGKSTLIDA ITGRRRLARG 
KVILHGEDVS RLGTVERRQR GLSRSFQRTS IFAGMTVLAQ VELASHEMGV ENSAADARAV
LEELNLASLG HRLAGNLGYG EQRRLDLALA LVGRPKLLML DEPMAGLSVK ESLDLAQHLK
ALASRRDIAV LLVEHDMDVV FGICSVITVF ELGRVIADGA PASVRANRRV REAYLGSAA