Gene Veis_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3988 
Symbol 
ID4694523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4376615 
End bp4377310 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID639851737 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_998713 
Protein GI121610906 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.34613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0761518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC TTCCCGCCAT CATTCGTGAC TTCGAGCGCG TCAGCGCCGA CCTCGTCGAA 
CAAGCCGCAG CCTTCCAGGC CGCCATTCTT TCCGACGTGG CGGGCCGGCG CGGCACCATG
CATGGCCGCG TGGCGCCGGT GCACGAGCGC ATGCAGCTTG CCGGCCCGGC CTTCACCGTC
GAAGTGCGCC CCGGCGACAA CCTGATGATC CATGCGGCGG TTGCGCTGGC CCGGCCCGGG
GATGTGCTGG TCATCGACGG CCGGGGCGAT CAGACCGTCG CGCTGATGGG CACCCTGATG
CTCAGCGCCT GCAAGCAGCG GGGTCTGGCG GGCGTGGTGG TCGATGCCGC GATCCGTGAC
CGGCTCGATG TGCTGGCGCT GGACTTTGCC GTGTTCAGCG TGGGCTTCAA CCCCGCAGGG
CCGACCAAGC TGGTGCCTGG CCGCATCAAC CACCCGATAT CGGCCGGTGG CGTGGTGGTC
CATCCGGGCG ACCTGATCGT TGGCGATGCC GATGGCGTGG TGGTCATCGA GCGCGCCAAG
GCCCCGGCGT TGATGGCGCT GGCCCGAAAC AAGGTGGCCG AAGAAGCCGC GCGCATCCAG
GCCATTGCCC GGGGCGATAC CTCCGCCCCA TGGCTGCCGG CCGCGCTCAA GGCAGCCGGG
GTGATACAGC AGGGGCAGGA AGGGCAGTTC CCGTGA
 
Protein sequence
MDQLPAIIRD FERVSADLVE QAAAFQAAIL SDVAGRRGTM HGRVAPVHER MQLAGPAFTV 
EVRPGDNLMI HAAVALARPG DVLVIDGRGD QTVALMGTLM LSACKQRGLA GVVVDAAIRD
RLDVLALDFA VFSVGFNPAG PTKLVPGRIN HPISAGGVVV HPGDLIVGDA DGVVVIERAK
APALMALARN KVAEEAARIQ AIARGDTSAP WLPAALKAAG VIQQGQEGQF P