| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3854 |
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| Symbol | |
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| ID | 4695239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4251602 |
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| End bp | 4252390 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639851603 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_998581 |
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| Protein GI | 121610774 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.449254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.615826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TTCTGGATGT GACGGGGCGC GTGGCGCTGG TGACGGGAGC CGGTCAGGGA
GTCGGCCAGC AGGTGGCTGA ACATCTGGCA GCCCATGGCG CGACCGTGAT CGTCAACGAT
TACTTCCTGG AGCGCGCGCA GGCGGTCGCC AAAGCCATTG GCAACGCTGG AGGCAAGGCT
TATGCCGTGC AGGCCGACGT CACGGACAAC GTCAGCGTCA AGGCCATGAT CGCGCAGGTG
CGCGATCTGG CCGGCCCGGT CGACGTGCTG GTGAACAATG CAGGCAATCT GGGCGCCCAT
CCGTCACCTG ACGGCCGCAA GCCATTCTGG GAATTCGGGC CGGAGGTCTG GAGCGGTGCC
GTGGATGTGA ACCTGTACGG CGTCATCAAC TGCACGGGCG CTGTGATCCC GGACATGATC
GAGCGCAAGA GCGGCCGCCT GATCACCATC ATTTCCGACG CGGGCCGTGT CGGTGAATCC
GGCCTGGAGG TGTACTCCGC GGCCAAGGCC GGGGCAGCCG GTTTCATGCG TGCGGTGGCT
CGCACCATGG GCCGTCACCA GGTCACGGCC AACTGCGTGG CGATCGCTGC CACGCTGACG
ACGCCAATCG AGGCGCGCTT GAATGCCGAT CCCGAGCGGC TGAAGAAGAT GATGTCGCAC
TACGTCATCC GCCGCCCTGG CAAGCCCACC GACGTAGCCA ACATGGTGCT GTTCCTGGCT
TCCGGCGCCA GCGACTGGAT CACCGGCCAG ACCTATCCGG TCAATGGCGG CTTCTCGTTC
TCGATGTGA
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| Protein sequence | MNDILDVTGR VALVTGAGQG VGQQVAEHLA AHGATVIVND YFLERAQAVA KAIGNAGGKA
YAVQADVTDN VSVKAMIAQV RDLAGPVDVL VNNAGNLGAH PSPDGRKPFW EFGPEVWSGA
VDVNLYGVIN CTGAVIPDMI ERKSGRLITI ISDAGRVGES GLEVYSAAKA GAAGFMRAVA
RTMGRHQVTA NCVAIAATLT TPIEARLNAD PERLKKMMSH YVIRRPGKPT DVANMVLFLA
SGASDWITGQ TYPVNGGFSF SM
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