| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3829 |
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| Symbol | |
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| ID | 4692456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4229410 |
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| End bp | 4230078 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639851578 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_998556 |
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| Protein GI | 121610749 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATC GACCATCCCG GGCTGGCGCT GCCAAACAAG GCAAAAGCAT GCAATGGCAA
TGGCTGCGCA AACAATTGCC GAAAAACCGT TCATGCACCA CAGTGACCGC AGCGCGAGGC
TTCACGCTGA TCGAACTCAT GGTGACACTG GCCTTGGCGG TCATTTTGGG CAGTTTGGCG
GCGCCCTCGG TGCGGGACTC CATTATTCGC AGCAGACTGA CCAATCTCGG TAACGAATTT
ATCGGCAGCA TTCTGAAAGT CCGCAGCGAG GCTGTCAATC GAAATACCTG TTTCACCTTG
TGCACGAGCA CCAATGCAGG CGATCCCGAG CCAACTTGCA CCGCAGCGCT GAAGCCCGAT
TGGAACAAGG GTTGGATCAT TTTCATCAAT CCTACCTGCG ATAGTCTGGA CCCGATCCTG
ACCCCGGAAC CGGAGGATCT GCTGCTGGCC CGCCCGGCGA CAGATGCGGA TTACAAATTG
CTGGCGGGAC AAGCAAGAAT GACATTCAAT GCGCGTGGCG GACTTCCGAA GAGCCAGTGG
GATCAGATCA ATCTGGTCTA CAAGGGGAAA GAAGATCCAT TGACAAAAAA ATTCGCCTTC
AATATTTGCC TGGATGCTCT GGGGATTACC CGCAGGATTC CATCGGATAG GGCATGTCAG
GATTACTGA
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| Protein sequence | MTNRPSRAGA AKQGKSMQWQ WLRKQLPKNR SCTTVTAARG FTLIELMVTL ALAVILGSLA
APSVRDSIIR SRLTNLGNEF IGSILKVRSE AVNRNTCFTL CTSTNAGDPE PTCTAALKPD
WNKGWIIFIN PTCDSLDPIL TPEPEDLLLA RPATDADYKL LAGQARMTFN ARGGLPKSQW
DQINLVYKGK EDPLTKKFAF NICLDALGIT RRIPSDRACQ DY
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