| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3554 |
|---|
| Symbol | |
|---|
| ID | 4693353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3930794 |
|---|
| End bp | 3931735 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639851309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998290 |
|---|
| Protein GI | 121610483 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCG AGCCGCAAAA CGCAGCGCCG TCGATCCATC GGACTGCGTT CGACGCCCTG
CCCGTTCATG GCCGCTTCGG TTACTGCGCG ATCATACAGC GCCCACATTA CCGCTGGCCC
CATGGTGCCG GGCTGGCCGT CTATCTCGGC TTCAACATCG AGCATTTCGC CTTTGGCCAA
GGGCTGGGCG CGCGCCTGGG GCCGGTGTGC CCGGAGCCTG ACGTGCTCAA CTACGCATGG
CGCGAATACG GCAACCGTGT CGGTGCCTGG CGCTGCCTGG AGCTGTTTGA CAGTCTCGGC
TTGCCGGTCG GCGTGTTGGC CAACACGGCG CTCTATGATC ACTGCCCCGA ACTGATCGCA
GCCTTCGTCG CGCGCGGCGA CGAACTGATC GGCCACGGTC ACAGCAATGC CCATCAGCAA
GGCACGCTCG ACGAAGCCGC CGAACGGGCG CTGCTGCAAC ACTGCCGCAG CCGAATGCAA
ACGCACAGCG GCCAGGCGCC GACCGGCTGG CTGTCGCCAT GGATTTCGGA GAGCTTCGCC
ACGCCGGATC TGCTGCTGGA AAGCGGCTAT CGCTACACCC TGAACTGGTG CCACGATGAC
CAGCCGACGC GCATGAAGAC CCGCAACGGC CAAGCCCTGT GGTCGATTCC GTATCCGCAG
GAAGTCAACG ACATCCCGAT GATCGTGGCG CGCCAGATGG ACGGCAAGGA CTTTGCCCAA
CTCATCATCG ACAACTTCGA CGAGATGCTC GAACAGTCAC GCAAGCAACC GCTGGTAATG
GGCATCGCCC TGCATCCCTA TCTGGTCGGC CAGCCGTATC GCCTGCGCCA CCTGCGCCGC
GCGCTGCAAC ACATTGCACA AGGGCGCGAC AAGGGCGATA TGTGGTTCAC CACGCCAGGT
GCGATTTGCG CTTACGTCGA TGGCCTGGAG AGCCTGAAAT AG
|
|---|
| Protein sequence | MHSEPQNAAP SIHRTAFDAL PVHGRFGYCA IIQRPHYRWP HGAGLAVYLG FNIEHFAFGQ
GLGARLGPVC PEPDVLNYAW REYGNRVGAW RCLELFDSLG LPVGVLANTA LYDHCPELIA
AFVARGDELI GHGHSNAHQQ GTLDEAAERA LLQHCRSRMQ THSGQAPTGW LSPWISESFA
TPDLLLESGY RYTLNWCHDD QPTRMKTRNG QALWSIPYPQ EVNDIPMIVA RQMDGKDFAQ
LIIDNFDEML EQSRKQPLVM GIALHPYLVG QPYRLRHLRR ALQHIAQGRD KGDMWFTTPG
AICAYVDGLE SLK
|
|---|
| |