Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3536 |
Symbol | |
ID | 4693411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3910153 |
End bp | 3911166 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639851292 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_998273 |
Protein GI | 121610466 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.584688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCG CACACAAACT CGCCACCACC GTCGGCACCG TGCTGGCACT GGCCGGCGCG CAGCACGCGG CCGCGCAGGG CAAGGGGCTC GATGAGCCTT TTCGCGACGG CTACAAGAAA GCGCTGGCCG GCAAGACGGT CGGCTTCATC CCGGTCGCGA TGGGGTTCGA TCTGACCAAT GGCTGGTACC TCGGGCTCAA GAAGGAACTG GAGCCCTCGG GCATGAAGGT GGTCTTGCGC GACCCGAACT GGAACACCGG CGCCGGCGCG CAGGCTTTCA CCGCGCTGAT CGCCGAAAAG CCCGCCGTGA TCGTGGTGCA CAACCCCGAC GTGCAGACCT ACGCCAAACT GATCACCAAG GCCGAGGCCG AGGGCATCTA CGTGGTGCAG ATCAACATGC GCTCGGCACA GCCGTCCACC GTCTTCGTCG GCGCCGACTG GATCGATGTC GGCGAGCGCG GCGCCACGGC GGTGATGCAA GCTTGCCAGG GCAAGTCGAA CAAGATCGCC ATCGTCCAGG GCGCGCCCAC GGCCGCGACC AGCGCCTACA CGCTCAAGGG CGTGGAAAAT GTGCTGGCGA AGAACCCGCA GCTCAAACTG GTGTCGAACC AGGCCGCCGA CTGGGATGCC ACCAAGGCCA AGGCGCTGAC GCAGACCGTG CTCAAGCAGC ACCCCGACCT GTGCGGCATC GTCGGCTTCT GGGACGGCAT GGACATCGGC ACGGCTGCGG CGATCAAGGA GGCGGGCCTG ACCGGCAAGG TGTTCCTGGC CACCTCGGGC GGCGGCGAGC AAAAAAGCGC GTGCGACCAG GTCAAGTCGG GCGCTTTCGA CTACCTCGTG AGCTACGACG TGCCGACGCA GGCCAGCAAC ATGGCGGCCA TGATCAAGTG GCTGGTGCAA GGCGGCGTGA AGCCGGGCGC GGCGCGGCAG AACATCTACA CCACGCTGCT GCCGATCACC AAGGAAAACG CCGGCGCCGA GGGCACCTGC TGGAAGCTCG CGGCCGCCAG GTAG
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Protein sequence | MNFAHKLATT VGTVLALAGA QHAAAQGKGL DEPFRDGYKK ALAGKTVGFI PVAMGFDLTN GWYLGLKKEL EPSGMKVVLR DPNWNTGAGA QAFTALIAEK PAVIVVHNPD VQTYAKLITK AEAEGIYVVQ INMRSAQPST VFVGADWIDV GERGATAVMQ ACQGKSNKIA IVQGAPTAAT SAYTLKGVEN VLAKNPQLKL VSNQAADWDA TKAKALTQTV LKQHPDLCGI VGFWDGMDIG TAAAIKEAGL TGKVFLATSG GGEQKSACDQ VKSGAFDYLV SYDVPTQASN MAAMIKWLVQ GGVKPGAARQ NIYTTLLPIT KENAGAEGTC WKLAAAR
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