| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3533 |
|---|
| Symbol | |
|---|
| ID | 4692790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3905198 |
|---|
| End bp | 3906766 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851289 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_998270 |
|---|
| Protein GI | 121610463 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.909049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG AACGGCCGCC CGAAGGCGCT CATACCGCAG CCGAAGGCGA AGGTGCCCCA
GTGCGCGCCG CCCGGCCGCC CGACCTGCTC GAACTGCGCC AGGCGACCAA GAAATACATG
GGCGTGCCCG CCATCGAGGC CGTCGACTTC ACGCTGCGGC AAGGCGAAAT CCATGCGCTG
CTCGGGGAGA ACGGCGCCGG CAAATCGACC CTGACCAAGG TGATGGCGGG TGTGGTCACG
CTCAGTTCGG GCCAGATGCT GGTGCAAGGC CGGCCAGTGC AACTGCGCAA CCCGCTCGAA
GCCCGGCACC AGGGCATCGC GATGGTGTTC CAGGAGACCA GCCTGGTGCC CACGATGACC
GTGGCGCAGA ACCTGTTCCT GGGCCAGGAG GCATTCTTCA ACCGGCTGCG CGGCGTATAC
ATCGCGGCGC AGCAGTTCCT GCAATCGCTC AATTTCGATA TCGACCCGAC CGCCACGGTC
AGCATGCTCG GCGCAGCGAA GAAGCAGATG GTCGAAATCG CCCGCGCCGT GCTGCACAAG
GCGCGCATCA TCATCTTCGA CGAGCCGACC GCCAGCCTGA CGCCCGAGGA GAAGAAATAC
TTCTTCGACC TGGTGTTCGC GCTCAAGGCG CGCGGCGTGT CGGTCATCTT CATCTCGCAC
GCGCTCGAAG AAGCGCTGCT GCTGGCCGAC CGCATCACCG TGCTGCGCGA CGGCCGCCAT
GTGGTGACCG ACACCAAGGC CCGCTTCGAC CGCGACCGCA TCGTGCAGGC CATGGTCGGG
CGCGACCTCT CGCAAACCAT CTACGGGCAG AAAAAGAACT TCGTGCGGCC GCAGGGCGAA
TGCCTGCTGT CGGTGCGCAA CCTGCGCATG GCGGCGATGG TCAAGAACAA CTCGCTGTCG
GTCTTCGCGG GCCAGGTCAC CGGCCTGTTC GGACTGGTCG GGGCGGGCCG CACCGAAACC
TTCAAGGTGG TGGCGGGGTT GATCAAGCGC GACTTCTTCC ACGGTGGCCA GGTGCTGGTG
CGCGGCCGTC CGGTGCGCTA CCGGGTGGCG CGCCAGGCGG TGCGCGACGG CATCGCCTAC
GTCACCGAAG ACCGCAAGCT CGAAGGCTTC TTCGAGATCA TGTCGATCGC CCGGAACATC
TACCTGGGCC TGCTGGGCAA ATTGCCCGGC GCGCATGGCC TGGTCGCACA GGCCCGCATC
CGGGAAATCG GCGCGCACTG GAGCCGGCTG CTCAACGTGC GCGCCATCGA CAAGGACGTG
AAGGTGATCG AACTGTCCGG GGGCAACCAG CAGAAAGTGG TGATTGCCAA ATCGCTGGTG
CAAGAGCCTG ACATCATCAT CTTCGACGAA CCGACGCGGG GCGTGGATGT GGGCGCCATC
GCCGAGATCC ATGCCGTGAT CAACCGGCTG GCCGATGCCG GCAAGGCGGT GGTGGTGATT
TCATCCTACC TGCCGGAGGT GATGGCGCTG TCGGACCGCA TCCTCGTGGC CAAGCAAGGC
AAAGTGGTCA CGGAATTCTC GGCCACCGAA GCCACACAGG AAGCGATCAT GTACGCGGCG
ATTCACTGA
|
|---|
| Protein sequence | MSAERPPEGA HTAAEGEGAP VRAARPPDLL ELRQATKKYM GVPAIEAVDF TLRQGEIHAL
LGENGAGKST LTKVMAGVVT LSSGQMLVQG RPVQLRNPLE ARHQGIAMVF QETSLVPTMT
VAQNLFLGQE AFFNRLRGVY IAAQQFLQSL NFDIDPTATV SMLGAAKKQM VEIARAVLHK
ARIIIFDEPT ASLTPEEKKY FFDLVFALKA RGVSVIFISH ALEEALLLAD RITVLRDGRH
VVTDTKARFD RDRIVQAMVG RDLSQTIYGQ KKNFVRPQGE CLLSVRNLRM AAMVKNNSLS
VFAGQVTGLF GLVGAGRTET FKVVAGLIKR DFFHGGQVLV RGRPVRYRVA RQAVRDGIAY
VTEDRKLEGF FEIMSIARNI YLGLLGKLPG AHGLVAQARI REIGAHWSRL LNVRAIDKDV
KVIELSGGNQ QKVVIAKSLV QEPDIIIFDE PTRGVDVGAI AEIHAVINRL ADAGKAVVVI
SSYLPEVMAL SDRILVAKQG KVVTEFSATE ATQEAIMYAA IH
|
|---|
| |