| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3394 |
|---|
| Symbol | |
|---|
| ID | 4692555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3763601 |
|---|
| End bp | 3764866 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639851151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998133 |
|---|
| Protein GI | 121610326 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.453261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.276031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT TTCTCCTTGG CCTGGCATGG CGCAGCGCCT GGAACCGGCG CTTCACGCTC
GTGCTCACCG TGTGCTCCAT CGCGTTGTCG ACCTTCATGC TGATCGGCGT GGAACGCATC
CGCACCGATC TGCGCGACAG CTTTACCAGC GCCGTCTCGG GCACGGACCT GATCGTCGGC
GCGCGGACGG GCTCCATACA GTTGCTGCTC TACGCGGTTT TCCACATTGG CGCCGCCACC
AACGATATCC GCTGGAGCAG CGTGCAGGCA CTCGGACAGC AACGCGGCGT TGCCTGGGTG
GTGCCGCTTT CGCTGGGGGA CTCGCACCGC GGATTTCCGG TACTGGGGAC ATCGGCGGGC
TATTTCGAGC ACTTGCGCTA CGGCGACCAG CAATCGCTGC GCCTGGAGCA AGGCAGCGTC
TTCGCGGACC TGTTCGACGC CGTGATCGGC GCCGAGGTCG CGGACCGGCT GGGCTACCGC
TTGGGGCAGC GCATCACCTT GGCCCATGGC AGCGGCGATT TGCATCTTTC CGATCATGCC
GACAAGCCGT TCAGGATCAC GGGCATCCTG GCGCGCACCG GAACGCCCGT GGACCGCACC
GTGCACATCA GCCTCGAAGC GATGCAAGCC TTGCATGTGG ATTGGTTTGC CGGCGCGCCC
ATCCCCGGCG GTCACATCGA CCCCGATCGA GTGCGCAGCA TGAACCTGCA GCCCAAGGCC
GTCACCGCCG CCCTCGTGGG GCTGAAGAAT CGCGCTGCCG TATTTTCCGT GCAGCGGCAG
GTCAACCAAT TTGCCGCCGA GCCGCTGATG TCCATTTTGC CGGGGGTGGC CCTGGATGAG
CTGTGGGATG TCATCGGCAC CGGCGAGCAG GCGCTGCTGC TCATGTCCGC CTTGGTGGCC
GCCGTCAGCA TGGCCGCTCT GGTCTCGGTG GTGCTTGCCG GGCTGAACGA AAGGCGCCGG
GAATTGGCGG TTCTTCGGGC CGTCGGCGCC AGTCCCCATC ATGTGCTGCT GCTCCTGGCC
CTGGAGGGGT CGATGGTCAC CATCTCCGGC ATCACCGTGG GCATTGTCGC CATGGTCGGG
GCCTTGGTCG CTGCCGGCCC ATGGCTACAG TCGGCCTATG GCCTGACCTT GCACGCGGCG
CAACCCACAA ACTTGCAATG GGCGCTGCTG GCGGGCCTGC TGCTCGCTGG CTCTCTGGCG
GGCCTGCTGC CCGGCTGGCG CGCATACCGG CTGGCGCTGG CCGACGGGCT GGCGCCAAGA
ATCTGA
|
|---|
| Protein sequence | MTGFLLGLAW RSAWNRRFTL VLTVCSIALS TFMLIGVERI RTDLRDSFTS AVSGTDLIVG
ARTGSIQLLL YAVFHIGAAT NDIRWSSVQA LGQQRGVAWV VPLSLGDSHR GFPVLGTSAG
YFEHLRYGDQ QSLRLEQGSV FADLFDAVIG AEVADRLGYR LGQRITLAHG SGDLHLSDHA
DKPFRITGIL ARTGTPVDRT VHISLEAMQA LHVDWFAGAP IPGGHIDPDR VRSMNLQPKA
VTAALVGLKN RAAVFSVQRQ VNQFAAEPLM SILPGVALDE LWDVIGTGEQ ALLLMSALVA
AVSMAALVSV VLAGLNERRR ELAVLRAVGA SPHHVLLLLA LEGSMVTISG ITVGIVAMVG
ALVAAGPWLQ SAYGLTLHAA QPTNLQWALL AGLLLAGSLA GLLPGWRAYR LALADGLAPR
I
|
|---|
| |