Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3379 |
Symbol | |
ID | 4694886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3750467 |
End bp | 3751303 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639851137 |
Product | extracellular solute-binding protein |
Protein accession | YP_998119 |
Protein GI | 121610312 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0252504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.274195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AGGCAATCTG CCAGTGCTTG GTAGCCGTTC TGACGCTGTT GGGCATGTGT TTTACTTCGC TGGCACATGC GGACAAGCTG GCAGACGTAT TGAAACGCGG TTATTTGATT GTGGGTACCA CAGGTTCCAG TCCACCTTTT GGCTTCAAGG ATGAGAAAGG CGAACTGCAG GGCTTCGATG TCGATATGAG CCGCCTGATC GCGAAAGCAC TGTTTGGTGA CCCGCAGAAG GTGAAATTTG TCCTGTTGGG CAACGAGGCA CGCTGGACCG CGCTGCAGAC TGATCAGGTT GACATGGTGG CACAATTTGC CACCATCACG CCTGAACGCT TGGTGCGTGT GGGCTTCACG CCCCGTTACT TTGACACGGG AATGACAGTG GTGGTTCGCA AGGATTCGAA GATCAAGTCG TTTGCCGACC TTGATAGTGC GGACGTGACC ATCGCGACCC TGACTGTCCC TGAGCAGATC GATCTGGTCA AGCGCATGGC ACCGAACGCC CGCGTTGCAA GTTTCGCAAC AGTCGATCAG CAATTCCTGG CATTGCGTTC GGGACGTGTA CAGGCGTTTC TCGTTGATCT ACCCATTGGC ATGTGGTACG GAGCGACCAG TCCTGATGCA AGGGTCATTC CAGGTGTGTA CGATGGATTT CAAAACTACG GAATTGCTTA TAAACTGGGC GAACTGAGCT GGAAGCAGTT CTTGGACGGA TTTGTAACCG ATCTCACCAC CGGCTATTCC TACGTCCAAT ACACGGTGCT CTACAGGAAG TATTTCAAGA TCAATCCTCC CCCACAGCGG GACTACAAGG TCATGGGTGC GATGTGA
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Protein sequence | MKFKAICQCL VAVLTLLGMC FTSLAHADKL ADVLKRGYLI VGTTGSSPPF GFKDEKGELQ GFDVDMSRLI AKALFGDPQK VKFVLLGNEA RWTALQTDQV DMVAQFATIT PERLVRVGFT PRYFDTGMTV VVRKDSKIKS FADLDSADVT IATLTVPEQI DLVKRMAPNA RVASFATVDQ QFLALRSGRV QAFLVDLPIG MWYGATSPDA RVIPGVYDGF QNYGIAYKLG ELSWKQFLDG FVTDLTTGYS YVQYTVLYRK YFKINPPPQR DYKVMGAM
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