Gene Veis_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3372 
Symbol 
ID4694798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3745085 
End bp3745573 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID639851131 
Productcolicin V production protein 
Protein accessionYP_998113 
Protein GI121610306 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00676354 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.15838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGC TGGATTGGAT TTTTCTCGCG GCACTGCTGC TCTCGATGCT GATCGGCGCA 
TGGCGCGGCC TGGTGTTCGA GCTGCTGTCG GTCCTGGGCT GGATCCTGTC GTTCTTTGTC
GCACAGTGGT TGGCTGCCGA CATGGCGGCA TGGTTGCCGA TGGGCGATTC CGCCGCTGCG
CTGCGCTATG CGGCAGGCTT TGTCGTGGTG TTCGTGGTGT CGGTATTTTT GTGCGGGTTT
CTGGCCCGGT CGGGCAAGAA ACTGGTGGAT GCGATCGGCC TGCGCCCTGT GGATCGCGCC
CTGGGCGCGG CCTTTGGCAT ATTGCGCGGT GTGGTCTTGC TGCTGGCCGT GGCGGTGGTG
GTGCGCCTGA CTCCGCTGCA CGAAGCGCTG TGGTGGCAAA AGTCGCAGGC AGCACCGGTG
CTGGCTGCAA TGCTCAAGGG TTTGAAACCG GCGTTGCCGC AAGACTTTGG CAGGTATCTG
CCTTCCTGA
 
Protein sequence
MAALDWIFLA ALLLSMLIGA WRGLVFELLS VLGWILSFFV AQWLAADMAA WLPMGDSAAA 
LRYAAGFVVV FVVSVFLCGF LARSGKKLVD AIGLRPVDRA LGAAFGILRG VVLLLAVAVV
VRLTPLHEAL WWQKSQAAPV LAAMLKGLKP ALPQDFGRYL PS