| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3226 |
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| Symbol | |
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| ID | 4695036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3600027 |
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| End bp | 3601697 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639850989 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_997974 |
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| Protein GI | 121610167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.191345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG ATTTTTTCGA CTACATCATC GTAGGTGCCG GCTCCGCAGG GTGCGTGCTG
GCCAACCGCC TGACCGAAGA CCCGCAGTTG CGGGTCTTGG TGCTGGAAGC CGGCCCTGCC
GACCACAGCC TGTTCATCCA TATGCCTTCG GCATTCGCCT ACCCGCTGGC CAATGACCGG
TACAACTGGT ACTACCACAC CGATCCCGAG CCTTTCATGG ACCAGCGCTC CATGTATTGC
CCAAGGGGGC GGGTGCTGGG CGGCTCCTCG TCGATCAACG GCATGGTCTA CATCCGTGGC
CACGCGCTGG ACTACGAGGG CTGGGCCAGT CGCCCGGGGC TGGCCAACTG GTCCTATGCC
GATTGCCTGC CATACTTTCG CAAGGCCGAA CACCGGGCCC GGGGTGGCGA TGCTTACCGG
GGCGACAGCG GCCCGCTGAA GGTGTCCACC GGCGCCTGCC GCAACCCGCT GTACAGCGCC
TTCATCGAAG CCGGGCAACA GGCCGGCTAC GCCTACACCG ACGACATGAA CGGCTATCGC
CAGGAGGGCC TGGGGCCGAT GGACATGACG GTCCACAAGG GCCGGCGCTG CAGCGCTGCC
GTGGCCTACC TGCGACCGGC GATGAAGCGC CCCAATCTGC AGGTGCGCAC CCGCGCGCTG
GTGGCCCGCG TGGCGTTCGA GCCTGGCAGC AGCCCGCCGC GCGCCATCGG TGTGCAAGTC
GTCAACGGCC AGCGCATCGA CCTGCTGCGC GCCAGCCGCG AAGTGATACT GTGCGGCGGC
GCGATCAACT CGCCACAACT GCTGCAACTG TCGGGCATCG GCGACCCCGA TGCGCTGCGC
CACCTGGGCA TTGCAGTGCT GGCACCGCTG CGCGGCGTCG GGGCCAACCT GCAAGATCAC
CTGGAAACCT ATGTGCAGTA CGCCTGCAAG GAACCGATTA CGCTGTACGG CGCCATGAAT
TGGCGCGCCA AGCTCAGGAT CGGCGCACAG TGGCTGCTCC AGGGCACCGG GCTGGGGGCG
ACGAACCACT TCGAATCGGG CGGCTTCATC CGTAGCGCAG CCGGGGTTCG GCACCCCGAC
TTGCAATACC ACTTCCTGCC GATGGCGATC AGCTACGACG GCAGCGCGCC GGCCAGCTTC
CACGGTTTCC AGGCCCATGT GGGGCCGATG CGGCCGACCA GCCGGGGCCA TGTCCGGCTG
CGCAGCGCCG ACCCCAAAGA GCCGCCGCAG ATCCTGTTCA ACTACATGGC GACCGAGCAG
GACCGCAAGG AAATGCGCGC CGGCATCCGC CTGACGCGCG AGATTTTTGC GCAGCCGGCC
TTTGACCGGT TCCGGGGCCG GGCAGTCTGC CCGACCGACG CCGTGCAAAC CGACGCCGAG
ATCGACGCCC ATATCCGCGC CCATGGCGAA AGCGCCCTGC ACCCTTCATG CAGCTGCCGC
ATGGGCAGCG ACGAGTGGGC CGTCACCGAT GGCAGCGCGC GCGTGCACGG CGTGGCCGGA
CTGCGCGTGG TCGACGCATC GATCATGCCC GATGTGGTCA GCGGCAACCT GAACGCGCCG
ACCATCATGC TGGCCGAAAA ACTGGCCGAC ACCATCTGCG GCAAAACGCC CCTGCCCCGC
TCCGACATGC CCTACTTCGT GCATCCCCAA TACAAGAGCG TGCAGCGCTG A
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| Protein sequence | MTTDFFDYII VGAGSAGCVL ANRLTEDPQL RVLVLEAGPA DHSLFIHMPS AFAYPLANDR
YNWYYHTDPE PFMDQRSMYC PRGRVLGGSS SINGMVYIRG HALDYEGWAS RPGLANWSYA
DCLPYFRKAE HRARGGDAYR GDSGPLKVST GACRNPLYSA FIEAGQQAGY AYTDDMNGYR
QEGLGPMDMT VHKGRRCSAA VAYLRPAMKR PNLQVRTRAL VARVAFEPGS SPPRAIGVQV
VNGQRIDLLR ASREVILCGG AINSPQLLQL SGIGDPDALR HLGIAVLAPL RGVGANLQDH
LETYVQYACK EPITLYGAMN WRAKLRIGAQ WLLQGTGLGA TNHFESGGFI RSAAGVRHPD
LQYHFLPMAI SYDGSAPASF HGFQAHVGPM RPTSRGHVRL RSADPKEPPQ ILFNYMATEQ
DRKEMRAGIR LTREIFAQPA FDRFRGRAVC PTDAVQTDAE IDAHIRAHGE SALHPSCSCR
MGSDEWAVTD GSARVHGVAG LRVVDASIMP DVVSGNLNAP TIMLAEKLAD TICGKTPLPR
SDMPYFVHPQ YKSVQR
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